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The map label for this gene is selD [H]

Identifier: 57238527

GI number: 57238527

Start: 1577733

End: 1578755

Strand: Reverse

Name: selD [H]

Synonym: CJE1677

Alternate gene names: 57238527

Gene position: 1578755-1577733 (Counterclockwise)

Preceding gene: 57238528

Following gene: 57238526

Centisome position: 88.8

GC content: 30.5

Gene sequence:

>1023_bases
CTGCAATATAAAAATCAAAATTTAACGCATTTTGTTAAAGCAGCAGGTTGAGCAGCGAAATTAAGCCCGGGTGGTCTTAA
AACAATTTTAAATTTCATGCAAAAAACTCCTGCTTTACTTAGTGATATCGGAAATAATGAAGATGCAAGCGTATATCAAA
TCAGCCGCGATTTAGCTTTGGTGCAAACGCTTGATTTTATCACTCCTATAGTAGATAGTGCTTATCATTTTGGTGCTATT
GCTGCAGCAAATGCTTTAAGCGATGTTTTTGCTATGGGTGCAGAGGTAATTAATGCCTTAAATATAGTAGGTTTTGATAC
TTGTAATCATGATGTAAATATCTTAAAAGAGCTTTTAGAAGGTGCAAATGATAAGGTTCAAGAATGCAATGCTTTAGTTG
TGGGTGGCCATACTATAGAAAGCACTGAGCTTTTTTTTGGACTTAGTGTTACAGGAAAAGTACATCCTAGTAAATTTATT
GCTAATAATACTTCTAAAATCGGAGATTGTATCATTTTAACCAAGCCTTTAGGAACAGGAATTTTAAGTACAGCTTTAAA
GGCGCAAATGTTAAATCAAAAACATTTAGATATAATGCTTAAAAACATGATGGAGTTAAATTATAAAGCCAGTCAAATTG
CTCTTAAATTTCATCCAAGTGCCATGAGTGATGTCACAGGTTTTGGACTTTTAGGACATTTAAAAGAAATGCTAAATAAA
AATATTTCTTTTGAAATTTTCCAAAATGAAATTCTTTTTCTAGAGGGAGCAAAAGAATATTTTAATATGGGTTTAATTCC
TGCTGGAGCTTATAAAAATTTAGAATTTATAAAAGAACTTATCCCTGATTTAAATGAAGAAAAATTATTACTTTGTGATC
CGCAAACTTCAGGAGGACTTTTAATTTCTATAAGTGAAAAAGAATCCTTAGAATGTTTAAAAAAACTAGAAGATGAAAAT
ATTCAAGCTAAAATTATTGCTAAGGTTGTAAATAAGCAAGAAAATGATATTATCATTTCTTAA

Upstream 100 bases:

>100_bases
TAAAAGCAAAGAACTTAAAATAGGAAATATAGGCAATGCTTATGAAATTTTAAACGAGCTTTTTGGTAAAGCAAAAATCA
TTACTCTATAAGGAAAAACA

Downstream 100 bases:

>100_bases
TTTTTGTTACTTATATACCCATTAAAATTTTTTTTATCATTTTTTATACATTTTCTATGATTTAAAATATTATTTTTATC
TTATTTATATATTATTTATT

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIGNNEDASVYQISRDLALVQTLDFITPIVDSAYHFGAI
AAANALSDVFAMGAEVINALNIVGFDTCNHDVNILKELLEGANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
ANNTSKIGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFHPSAMSDVTGFGLLGHLKEMLNK
NISFEIFQNEILFLEGAKEYFNMGLIPAGAYKNLEFIKELIPDLNEEKLLLCDPQTSGGLLISISEKESLECLKKLEDEN
IQAKIIAKVVNKQENDIIIS

Sequences:

>Translated_340_residues
MQYKNQNLTHFVKAAG*AAKLSPGGLKTILNFMQKTPALLSDIGNNEDASVYQISRDLALVQTLDFITPIVDSAYHFGAI
AAANALSDVFAMGAEVINALNIVGFDTCNHDVNILKELLEGANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
ANNTSKIGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFHPSAMSDVTGFGLLGHLKEMLNK
NISFEIFQNEILFLEGAKEYFNMGLIPAGAYKNLEFIKELIPDLNEEKLLLCDPQTSGGLLISISEKESLECLKKLEDEN
IQAKIIAKVVNKQENDIIIS
>Mature_340_residues
MQYKNQNLTHFVKAAG*AAKLSPGGLKTILNFMQKTPALLSDIGNNEDASVYQISRDLALVQTLDFITPIVDSAYHFGAI
AAANALSDVFAMGAEVINALNIVGFDTCNHDVNILKELLEGANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
ANNTSKIGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFHPSAMSDVTGFGLLGHLKEMLNK
NISFEIFQNEILFLEGAKEYFNMGLIPAGAYKNLEFIKELIPDLNEEKLLLCDPQTSGGLLISISEKESLECLKKLEDEN
IQAKIIAKVVNKQENDIIIS

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=322, Percent_Identity=29.5031055900621, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI15011844, Length=309, Percent_Identity=27.5080906148867, Blast_Score=99, Evalue=5e-21,
Organism=Escherichia coli, GI1788062, Length=344, Percent_Identity=35.1744186046512, Blast_Score=202, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17543426, Length=305, Percent_Identity=30.4918032786885, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24653602, Length=319, Percent_Identity=29.153605015674, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24653604, Length=319, Percent_Identity=29.153605015674, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI28574119, Length=235, Percent_Identity=27.2340425531915, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28574118, Length=219, Percent_Identity=27.8538812785388, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 37026; Mature: 37026

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYKNQNLTHFVKAAGAAKLSPGGLKTILNFMQKTPALLSDIGNNEDASVYQISRDLALV
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHH
QTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNIVGFDTCNHDVNILKELLEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHC
ANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFIANNTSKIGDCIILTKPLGTGI
CCCCHHHCCEEEECCCEEECCEEEEEEEEECCCCCHHHHHCCCCCCCCEEEEECCCCCHH
LSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFHPSAMSDVTGFGLLGHLKEMLNKN
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
ISFEIFQNEILFLEGAKEYFNMGLIPAGAYKNLEFIKELIPDLNEEKLLLCDPQTSGGLL
CEEEEECCEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEE
ISISEKESLECLKKLEDENIQAKIIAKVVNKQENDIIIS
EEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEC
>Mature Secondary Structure
MQYKNQNLTHFVKAAGAAKLSPGGLKTILNFMQKTPALLSDIGNNEDASVYQISRDLALV
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHH
QTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNIVGFDTCNHDVNILKELLEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHC
ANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFIANNTSKIGDCIILTKPLGTGI
CCCCHHHCCEEEECCCEEECCEEEEEEEEECCCCCHHHHHCCCCCCCCEEEEECCCCCHH
LSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFHPSAMSDVTGFGLLGHLKEMLNKN
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
ISFEIFQNEILFLEGAKEYFNMGLIPAGAYKNLEFIKELIPDLNEEKLLLCDPQTSGGLL
CEEEEECCEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEE
ISISEKESLECLKKLEDENIQAKIIAKVVNKQENDIIIS
EEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]