Click here to switch to the map view.

The map label for this gene is ccoO

Identifier: 57238512

GI number: 57238512

Start: 1562142

End: 1562807

Strand: Reverse

Name: ccoO

Synonym: CJE1662

Alternate gene names: NA

Gene position: 1562807-1562142 (Counterclockwise)

Preceding gene: 57238513

Following gene: 57238511

Centisome position: 87.91

GC content: 33.78

Gene sequence:

>666_bases
ATGTTTAGTTGGTTAGAAAAAAATCCATTCTTTTTTGCTGTAGCTGTTTTTGTAGTGATTGCTTATGCAGGCATAGTTGA
AGTTTTACCAAATTTTGCAGAAAATGCAAGACCAATTGAAGGTAAAAAACCTTATACGGTTTTACAACTTGCAGGGCGTG
CAGTATATATTAAAGATAGTTGTAATGCTTGTCATTCACAGCTTATTCGTCCATTTAAATCAGAAACAGATCGTTATGGT
ATGTATTCTGTAAGTGGTGAATTTGCTTATGATAGACCTTTTCTTTGGGGCTCAAAAAGAACAGGACCTGATCTTACTCG
TGTAGGAAATTATAGAACGGCTGATTGGCATGAAAATCATATGTGGGATCCTACTTCTGTTGTTCCAGATTCTATTATGC
CTTCATATAAGCATATGTTTAAAAATAATGCAGATATTGAAACTGCTTATGCTGAGGCTTTAACTGTGAAAAAAGTTTTC
AATGTTCCTTATGATGCAGAAAATGGAACAAAACTTGGTTCTTGGGAGGATGCACAAGCTGAAGTAAAAGCTGAAGCTCA
GGCTATAGTTGATCAAATGAAAAATCAAGAAGTAAAAGATGCTTTTGCTAAAGGTGAAATCAAAGAAATAGTTGCTTTGA
TCGCTTATTTAAATAGTTTAAAGTAA

Upstream 100 bases:

>100_bases
TATGTTTACTTATAATATTTACAAAACAATTGCTTGTGGAAGAGTGCTTGATAAAGAACCAAAAAGCGCTTCGCCTATAG
CAGCATAAAAAGGAGAAAAT

Downstream 100 bases:

>100_bases
GATGATGGAACATTTATCAATAGTTTTTGATGTGATTAAAAATTTAATCACATTTGATTTAGCAACAGTTCAAAAACATG
AGTGGGAGATTTTCCAAGGT

Product: cbb3-type cytochrome C oxidase subunit II

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cb-Type Cytochrome C Oxidase Subunit II; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome-C Oxidase FixO Chain; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Cytochrome-Cbb3 Oxidase Subunit I; Transmembrane Cytochrome C Oxidase FixO Protein; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Family Protein; Cytochrome C Oxidase CcoO Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKPYTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYG
MYSVSGEFAYDRPFLWGSKRTGPDLTRVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
NVPYDAENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLNSLK

Sequences:

>Translated_221_residues
MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKPYTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYG
MYSVSGEFAYDRPFLWGSKRTGPDLTRVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
NVPYDAENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLNSLK
>Mature_221_residues
MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKPYTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYG
MYSVSGEFAYDRPFLWGSKRTGPDLTRVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
NVPYDAENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLNSLK

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 24980; Mature: 24980

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKPYTVLQLAGRAVYIKDS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCEEEEECC
CNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTGPDLTRVGNYRTADWHENH
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
MWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVFNVPYDAENGTKLGSWEDAQA
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
EVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLNSLK
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKPYTVLQLAGRAVYIKDS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCEEEEECC
CNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTGPDLTRVGNYRTADWHENH
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
MWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVFNVPYDAENGTKLGSWEDAQA
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
EVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLNSLK
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA