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The map label for this gene is ccoN [H]

Identifier: 57238513

GI number: 57238513

Start: 1562820

End: 1564286

Strand: Reverse

Name: ccoN [H]

Synonym: CJE1663

Alternate gene names: 57238513

Gene position: 1564286-1562820 (Counterclockwise)

Preceding gene: 57238514

Following gene: 57238512

Centisome position: 87.99

GC content: 35.58

Gene sequence:

>1467_bases
ATGCATCCAGGTAATGTATTAAATTACGACTATACGGTTACAAGATATTTTATGTTTGCGACCATATTGTTTGGCATTGT
TGGTATGGCTATAGGAACTCTTATAGCTTTTCAAATGGCATATCCTAATTTAAACTATTTAGCAGGAGAATATGCCACTT
TTTCAAGACTTAGACCACTTCATACTTCGGGTGTGATTTTTGGTTTTATGCTTTCAGGGATTTGGGCAACTTGGTATTAT
ATAGGTCAGCGTGTTCTTAAAGTGAGTATGGCTGAGTCAAGATTTTTAATGGCTGTTGGTAAGCTTCATTTTTGGCTTTA
TATGCTTACTATGGTTTTAGCTGTTATATCTTTGTTTATGGGTGTGACTACATCTAAAGAATATGCAGAGCTTGAGTGGC
CTTTAGATATTCTTGTTGTTCTTGTTTGGGTTTTATGGGGTGTAAGTATTTTTGGACTTATTGGAATTCGCCGTGAAAAA
ACCCTTTATATTTCTCTATGGTATTATATAGCTACATTTTTAGGTATAGCTATGCTTTATCTTTTTAACAACATGGAAGT
ACCAACTTATTTTGTTACTGGAATGGGTAAATGGTGGCATAGTGTATCAATGTATGCAGGAACAAATGATGCTTTAGTAC
AATGGTGGTATGGACATAATGCTGTGGCATTTGTATTTACTGTGGGTATTATTGCTCAAATTTATTACTTCTTGCCAAAA
GAAAGTGGTCAGCCGATTTTCTCTTATAAACTCTCTTTATTTGCATTTTGGGGCTTAATGTTTGTTTATCTTTGGGCAGG
TGGTCACCATTTGATTTATTCAACTGTACCTGATTGGATGCAAACTATGGGTTCGGTTTTCTCTGTAGTATTGATTTTAC
CTTCTTGGGGCTCAGCGATTAATATCTTGCTTACTATGAAAGGTGAGTGGAGTCAGCTTCGCGAGAGTCCGTTGATTAAA
TTTATGATTTTGGCATCAACTTTCTATATGTTCTCAACACTTGAAGGGCCAATTCTTTCAATTAAATCTGTTAATGCTTT
AGCACACTTTACAGATTGGATTCCAGGACATGTTCATGATGGAACATTAGGTTGGGTAGGATTTATGACTATGGCTGCGC
TTTATCATATGACTCCTAGAGTTTTCAAAAGAGAGCTTTATAGCAAATCTTTAATGGAAGCTCAATTTTGGATCCAAACC
ACAGGTATAGTTCTTTATTTTGCTTCAATGTGGATTGCGGGTATTACTCAAGGTATGATGTGGAGAGCGACAGATGAGTA
TGGTAACTTGCTTTATAGCTTTATTGATACTGTTGTGGCTATTGTTCCTTATTATTGGATTAGAGCGATTGGTGGATTGT
TGTATCTTATCGGTTTCTTTATGTTTACTTATAATATTTACAAAACAATTGCTTGTGGAAGAGTGCTTGATAAAGAACCA
AAAAGCGCTTCGCCTATAGCAGCATAA

Upstream 100 bases:

>100_bases
GCATAACAAATGATTAACAAAATTGTTGTTTTTAAGAAAAAATGTATAATTAATATTCTATAATATTCTCTTGTTATCAA
AAATTTTAAGGAGAAAGTCG

Downstream 100 bases:

>100_bases
AAAGGAGAAAATATGTTTAGTTGGTTAGAAAAAAATCCATTCTTTTTTGCTGTAGCTGTTTTTGTAGTGATTGCTTATGC
AGGCATAGTTGAAGTTTTAC

Product: cbb3-type cytochrome C oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MHPGNVLNYDYTVTRYFMFATILFGIVGMAIGTLIAFQMAYPNLNYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYY
IGQRVLKVSMAESRFLMAVGKLHFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYGHNAVAFVFTVGIIAQIYYFLPK
ESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTVPDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIK
FMILASTFYMFSTLEGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLMEAQFWIQT
TGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAIGGLLYLIGFFMFTYNIYKTIACGRVLDKEP
KSASPIAA

Sequences:

>Translated_488_residues
MHPGNVLNYDYTVTRYFMFATILFGIVGMAIGTLIAFQMAYPNLNYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYY
IGQRVLKVSMAESRFLMAVGKLHFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYGHNAVAFVFTVGIIAQIYYFLPK
ESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTVPDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIK
FMILASTFYMFSTLEGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLMEAQFWIQT
TGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAIGGLLYLIGFFMFTYNIYKTIACGRVLDKEP
KSASPIAA
>Mature_488_residues
MHPGNVLNYDYTVTRYFMFATILFGIVGMAIGTLIAFQMAYPNLNYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYY
IGQRVLKVSMAESRFLMAVGKLHFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYGHNAVAFVFTVGIIAQIYYFLPK
ESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTVPDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIK
FMILASTFYMFSTLEGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLMEAQFWIQT
TGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAIGGLLYLIGFFMFTYNIYKTIACGRVLDKEP
KSASPIAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 55901; Mature: 55901

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPGNVLNYDYTVTRYFMFATILFGIVGMAIGTLIAFQMAYPNLNYLAGEYATFSRLRPL
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCC
HTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKLHFWLYMLTMVLAVISLFM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREKTLYISLWYYIATFLGIAMLY
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
LFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYGHNAVAFVFTVGIIAQIYYFLPK
HHCCCCCCCCEEECCHHHHHHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC
ESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTVPDWMQTMGSVFSVVLILPSWGSAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEE
NILLTMKGEWSQLRESPLIKFMILASTFYMFSTLEGPILSIKSVNALAHFTDWIPGHVHD
EEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCC
GTLGWVGFMTMAALYHMTPRVFKRELYSKSLMEAQFWIQTTGIVLYFASMWIAGITQGMM
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
WRATDEYGNLLYSFIDTVVAIVPYYWIRAIGGLLYLIGFFMFTYNIYKTIACGRVLDKEP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KSASPIAA
CCCCCCCC
>Mature Secondary Structure
MHPGNVLNYDYTVTRYFMFATILFGIVGMAIGTLIAFQMAYPNLNYLAGEYATFSRLRPL
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCC
HTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKLHFWLYMLTMVLAVISLFM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREKTLYISLWYYIATFLGIAMLY
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
LFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYGHNAVAFVFTVGIIAQIYYFLPK
HHCCCCCCCCEEECCHHHHHHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC
ESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTVPDWMQTMGSVFSVVLILPSWGSAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEE
NILLTMKGEWSQLRESPLIKFMILASTFYMFSTLEGPILSIKSVNALAHFTDWIPGHVHD
EEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCC
GTLGWVGFMTMAALYHMTPRVFKRELYSKSLMEAQFWIQTTGIVLYFASMWIAGITQGMM
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
WRATDEYGNLLYSFIDTVVAIVPYYWIRAIGGLLYLIGFFMFTYNIYKTIACGRVLDKEP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KSASPIAA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]