| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238465
Identifier: 57238465
GI number: 57238465
Start: 1518157
End: 1519500
Strand: Reverse
Name: 57238465
Synonym: CJE1615
Alternate gene names: NA
Gene position: 1519500-1518157 (Counterclockwise)
Preceding gene: 57238466
Following gene: 57238464
Centisome position: 85.47
GC content: 27.53
Gene sequence:
>1344_bases ATGTTTATTATATATGATTTTACTCGTTTAGATCAAAGACAGAATTTGCCTACACCTTCTGGTGTAGATAGGGTTGATTT ATATTATATATTGTTTTTATTAAAAACCTATAGCAAGATTATTTTTGTTCGTGGTTATGGTGGCTACTTAAAAACATATC CAACACAAAGTGCTTTAGATGTACTAAGAAAGATAGCGAAAAATTGGGCAGAGATTGATAATATTTCTTATAATATTGAT AAAAATGATTTTATTAATACAAAAATAGATGCAGAAAGAATTTTGAAAAATAATATACAATATACTTATTTTAATCTTAC TCATAGTCTTTTAATAGGAAGATATACTATAGCTAAATTTGCCGTAAAAGATAATATTAAAATGATTTATTTTTGTCATG ATATGACGCCAATTACACATCCAGAGTATCATGCAGAGGGAATGATTTCTTTTAAACAGCATAGTTGTGTGATGAAATTA ATGCTTTGGAGTGCGGATTTAATTCTTACTACTTCTCAAGCAGTACAACAAGATGTTTTGAATTATTCAAAAGAAATAGG TGTCAATCCTCCAAAAGTTGTTGCGAAAGAAATAGGTGCTGAAGAAAATTTTCTTAAAGCAAGATGGAGTAAGCAAGATT CTCATAAACATTTTATTTATGTTGGGACTTTTGAGCCAAGAAAAAATCATATATTATTATTTTTAGCATGGAAAAAATTA TATTCTATTTTACAAGAAAACACGCCCATGCTTTACATTATAGGAAGAAAAGGGTGGTTGATCGACTGGCTTGATAGATA TTTTGAAGTTGAACCTAATGTTTCAAGATTTGTAAAAAGATTAGAAAATATTCAAGATTCACAATTAGAAAAATTAATGC TTGAATCATATGCTACATTAAATCCATCATATACTGAAGGTTGGGGTATGCCTGTAGCTGAATCTGTATCTATGGGTGTA CCAACTATATGTTCTGATATACCAGCTTATCATGAGAGTTCTCAGGAATGTGCTATATTTTTATCTCCACTTAATGTAGA TGTTTGGGTTGATACTATTTTAGATGTTCTAAGTGATAGGGTGATTTTTCCTGATTATGTTTATAAAATTCCTACTTGGA AAGAATATTTTGCTGAAATAGATGAGATTTTAAATAAGGATTTCTTTTTAAGAGATAAAAAACAATATATACAAGTTTTT TACAATAGTTTAGAAGATTTTCATTTTGCAGCACATAAAATACAACCTAATCAAAAAGTTAAAAAAAGCATTAAATATAA AATGAGATTAAAACTCTTAAGGTCAAAATTTTATTTTGTTAGGTTTTTTGGACAATTTTTTTAA
Upstream 100 bases:
>100_bases TTCCTATTAGTCCAAAAATGTTAAAGTTAAATCAAGATTCAAGAATGTTAGGAATATTTTTTCATTCTATAGATATTCAT GAGGTAAAAAAAGGTTAGAA
Downstream 100 bases:
>100_bases CTTTAAAAATCAAAAAGAGGAGGGATAGTTAAAATATGCAAAGTATAATTGTAAAGGTATGTAAAATTCCTATTTTTAAA ACAATAAGTGATGATAATTT
Product: capsular polysaccharide biosynthesis glycosyltransferase WcbB
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase; Mannosyltransferase A; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase WbpX; Glycosyl Transferase Group 1 Protein; Mannosyltransferase B; Mannosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Glycosyltransferase WbpY; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Mannosyl Transferase B; Bifunctional Glycosyltransferase; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MFIIYDFTRLDQRQNLPTPSGVDRVDLYYILFLLKTYSKIIFVRGYGGYLKTYPTQSALDVLRKIAKNWAEIDNISYNID KNDFINTKIDAERILKNNIQYTYFNLTHSLLIGRYTIAKFAVKDNIKMIYFCHDMTPITHPEYHAEGMISFKQHSCVMKL MLWSADLILTTSQAVQQDVLNYSKEIGVNPPKVVAKEIGAEENFLKARWSKQDSHKHFIYVGTFEPRKNHILLFLAWKKL YSILQENTPMLYIIGRKGWLIDWLDRYFEVEPNVSRFVKRLENIQDSQLEKLMLESYATLNPSYTEGWGMPVAESVSMGV PTICSDIPAYHESSQECAIFLSPLNVDVWVDTILDVLSDRVIFPDYVYKIPTWKEYFAEIDEILNKDFFLRDKKQYIQVF YNSLEDFHFAAHKIQPNQKVKKSIKYKMRLKLLRSKFYFVRFFGQFF
Sequences:
>Translated_447_residues MFIIYDFTRLDQRQNLPTPSGVDRVDLYYILFLLKTYSKIIFVRGYGGYLKTYPTQSALDVLRKIAKNWAEIDNISYNID KNDFINTKIDAERILKNNIQYTYFNLTHSLLIGRYTIAKFAVKDNIKMIYFCHDMTPITHPEYHAEGMISFKQHSCVMKL MLWSADLILTTSQAVQQDVLNYSKEIGVNPPKVVAKEIGAEENFLKARWSKQDSHKHFIYVGTFEPRKNHILLFLAWKKL YSILQENTPMLYIIGRKGWLIDWLDRYFEVEPNVSRFVKRLENIQDSQLEKLMLESYATLNPSYTEGWGMPVAESVSMGV PTICSDIPAYHESSQECAIFLSPLNVDVWVDTILDVLSDRVIFPDYVYKIPTWKEYFAEIDEILNKDFFLRDKKQYIQVF YNSLEDFHFAAHKIQPNQKVKKSIKYKMRLKLLRSKFYFVRFFGQFF >Mature_447_residues MFIIYDFTRLDQRQNLPTPSGVDRVDLYYILFLLKTYSKIIFVRGYGGYLKTYPTQSALDVLRKIAKNWAEIDNISYNID KNDFINTKIDAERILKNNIQYTYFNLTHSLLIGRYTIAKFAVKDNIKMIYFCHDMTPITHPEYHAEGMISFKQHSCVMKL MLWSADLILTTSQAVQQDVLNYSKEIGVNPPKVVAKEIGAEENFLKARWSKQDSHKHFIYVGTFEPRKNHILLFLAWKKL YSILQENTPMLYIIGRKGWLIDWLDRYFEVEPNVSRFVKRLENIQDSQLEKLMLESYATLNPSYTEGWGMPVAESVSMGV PTICSDIPAYHESSQECAIFLSPLNVDVWVDTILDVLSDRVIFPDYVYKIPTWKEYFAEIDEILNKDFFLRDKKQYIQVF YNSLEDFHFAAHKIQPNQKVKKSIKYKMRLKLLRSKFYFVRFFGQFF
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52826; Mature: 52826
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIIYDFTRLDQRQNLPTPSGVDRVDLYYILFLLKTYSKIIFVRGYGGYLKTYPTQSALD CEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHH VLRKIAKNWAEIDNISYNIDKNDFINTKIDAERILKNNIQYTYFNLTHSLLIGRYTIAKF HHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH AVKDNIKMIYFCHDMTPITHPEYHAEGMISFKQHSCVMKLMLWSADLILTTSQAVQQDVL HHHCCCEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEECHHHHHHHHH NYSKEIGVNPPKVVAKEIGAEENFLKARWSKQDSHKHFIYVGTFEPRKNHILLFLAWKKL HHHHHCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEHHHH YSILQENTPMLYIIGRKGWLIDWLDRYFEVEPNVSRFVKRLENIQDSQLEKLMLESYATL HHHHHCCCCEEEEECCCCCHHHHHHHHEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC NPSYTEGWGMPVAESVSMGVPTICSDIPAYHESSQECAIFLSPLNVDVWVDTILDVLSDR CCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC VIFPDYVYKIPTWKEYFAEIDEILNKDFFLRDKKQYIQVFYNSLEDFHFAAHKIQPNQKV EECCHHHEECCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH KKSIKYKMRLKLLRSKFYFVRFFGQFF HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFIIYDFTRLDQRQNLPTPSGVDRVDLYYILFLLKTYSKIIFVRGYGGYLKTYPTQSALD CEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHH VLRKIAKNWAEIDNISYNIDKNDFINTKIDAERILKNNIQYTYFNLTHSLLIGRYTIAKF HHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH AVKDNIKMIYFCHDMTPITHPEYHAEGMISFKQHSCVMKLMLWSADLILTTSQAVQQDVL HHHCCCEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEECHHHHHHHHH NYSKEIGVNPPKVVAKEIGAEENFLKARWSKQDSHKHFIYVGTFEPRKNHILLFLAWKKL HHHHHCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEHHHH YSILQENTPMLYIIGRKGWLIDWLDRYFEVEPNVSRFVKRLENIQDSQLEKLMLESYATL HHHHHCCCCEEEEECCCCCHHHHHHHHEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC NPSYTEGWGMPVAESVSMGVPTICSDIPAYHESSQECAIFLSPLNVDVWVDTILDVLSDR CCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC VIFPDYVYKIPTWKEYFAEIDEILNKDFFLRDKKQYIQVFYNSLEDFHFAAHKIQPNQKV EECCHHHEECCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH KKSIKYKMRLKLLRSKFYFVRFFGQFF HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA