| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238464
Identifier: 57238464
GI number: 57238464
Start: 1516685
End: 1518121
Strand: Reverse
Name: 57238464
Synonym: CJE1614
Alternate gene names: NA
Gene position: 1518121-1516685 (Counterclockwise)
Preceding gene: 57238465
Following gene: 57238463
Centisome position: 85.39
GC content: 24.01
Gene sequence:
>1437_bases ATGCAAAGTATAATTGTAAAGGTATGTAAAATTCCTATTTTTAAAACAATAAGTGATGATAATTTGAAAAAATATTATTT ATTGGGTGTTTTATTTTTAAGAATTCAAATTTTTAAGAAAAGCAAAAAATATTCTTTATTTGGTTTGCCAATTTTAAAAT TATTTTATAGTGATAATATTTCAAAATTTTGCAATATAAATCAACAACAGCAAACAATGGAAAAGTTGATAGGGCAATTA AATAAAAATGATATAGTTAAAGAGAGTGATTTTGCTTTTTTAAAATCTAGAAAAACAAATAAAGAAAAGAGTGCCGTTTT TGGTGTTTTACCGCCAGAAAAAACGGGAATAGCTATTTTTAATCACAATGCCTTTGTTGATTGTGACTATTTTGATATGT TTTCCGATATTCGTGATTTGAGTGTAGCTAGAGGATTATCTAAAAATGTTTTTGATTTAAAAACCTTTATAAAATTTGAT ATAAATTATTTGTATAAAAAATTTATTTATATTTTGGGAAATTCTAGTCATAATAATCCATATTTAAATATGGCAAAAAA TAGCATTGATAAGCAAAAATCTTGGCTTTATATTCATGAAGCTAATTTAAATAATTTATTATTTTCTCATTGCAATGGTA ACTTTTTAACTATGAAACAGTATCTGATTGAGCATTATCCGGAATTTAATTCAGAACTTATTGAGCTTAAAAATTTTCAA GAATTTAAAATTTGGAATGAAGAATTAAAAATTTACAGTTTAAGAGTTATTGTTGGATTAACAAATATTTTCAATTTTAT AGTAAATAACAGCTTATGTAAGAATTTGGTTTTAAAAGAATTAAAAGACTGTAAGGTTAACATTATCGAGGCTTTTTTAC CATTACCTAAAATTGTAAATATCAGTCATTCTGGTCTTGATAAAAAAAATAGTCAATTTTATATTGGAGCTTTTGGTGTT CCTCATGAGTTAAAATTTTCTTTAGAAATAGTTCAGGCGATAGAGTATCTTAATGAATATAAGAATATGAGTATAAAGTT GTTGGTTGTTGGCTATGGGGCTAATGATTTTTTTAAAAAATATGATTTTAATAAATCTTATCTGGAAATTTATGAAAATG TTAGTGATACTCAATTTTATGATTTAATTAAAGAAGTTGATTTGGTGATTCAATTAAGAAAAAAACCTCATGGGGAGAGT TCTGGACCGATAGTAAGTGCACTAGTTTTAGATAAAAAGATAATTACAAGTAAAGATTTTTTAGATAAAAAAATAGAGGA TAAAGTATTTGTGCTAGATAACCATGAGCTTGATTATAAAAAAATAGCAGAAAAGATACTTGAATGTATTCAAGTTTCTA GCAATGTGGTTAATTATAGTGAGATTAAGAATTCATATACTTATAGTAATCTTGTTAAGTTATTGGATGAATTATGA
Upstream 100 bases:
>100_bases AAATGAGATTAAAACTCTTAAGGTCAAAATTTTATTTTGTTAGGTTTTTTGGACAATTTTTTTAACTTTAAAAATCAAAA AGAGGAGGGATAGTTAAAAT
Downstream 100 bases:
>100_bases TTAATTACAAAAAAAAGCTACATTTAATAATTTTTAAAAAAGTATTTTCTTGTGATTTTTTAAAAAGGAAAGCTATTGTT TTTACAGATATGTTTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MQSIIVKVCKIPIFKTISDDNLKKYYLLGVLFLRIQIFKKSKKYSLFGLPILKLFYSDNISKFCNINQQQQTMEKLIGQL NKNDIVKESDFAFLKSRKTNKEKSAVFGVLPPEKTGIAIFNHNAFVDCDYFDMFSDIRDLSVARGLSKNVFDLKTFIKFD INYLYKKFIYILGNSSHNNPYLNMAKNSIDKQKSWLYIHEANLNNLLFSHCNGNFLTMKQYLIEHYPEFNSELIELKNFQ EFKIWNEELKIYSLRVIVGLTNIFNFIVNNSLCKNLVLKELKDCKVNIIEAFLPLPKIVNISHSGLDKKNSQFYIGAFGV PHELKFSLEIVQAIEYLNEYKNMSIKLLVVGYGANDFFKKYDFNKSYLEIYENVSDTQFYDLIKEVDLVIQLRKKPHGES SGPIVSALVLDKKIITSKDFLDKKIEDKVFVLDNHELDYKKIAEKILECIQVSSNVVNYSEIKNSYTYSNLVKLLDEL
Sequences:
>Translated_478_residues MQSIIVKVCKIPIFKTISDDNLKKYYLLGVLFLRIQIFKKSKKYSLFGLPILKLFYSDNISKFCNINQQQQTMEKLIGQL NKNDIVKESDFAFLKSRKTNKEKSAVFGVLPPEKTGIAIFNHNAFVDCDYFDMFSDIRDLSVARGLSKNVFDLKTFIKFD INYLYKKFIYILGNSSHNNPYLNMAKNSIDKQKSWLYIHEANLNNLLFSHCNGNFLTMKQYLIEHYPEFNSELIELKNFQ EFKIWNEELKIYSLRVIVGLTNIFNFIVNNSLCKNLVLKELKDCKVNIIEAFLPLPKIVNISHSGLDKKNSQFYIGAFGV PHELKFSLEIVQAIEYLNEYKNMSIKLLVVGYGANDFFKKYDFNKSYLEIYENVSDTQFYDLIKEVDLVIQLRKKPHGES SGPIVSALVLDKKIITSKDFLDKKIEDKVFVLDNHELDYKKIAEKILECIQVSSNVVNYSEIKNSYTYSNLVKLLDEL >Mature_478_residues MQSIIVKVCKIPIFKTISDDNLKKYYLLGVLFLRIQIFKKSKKYSLFGLPILKLFYSDNISKFCNINQQQQTMEKLIGQL NKNDIVKESDFAFLKSRKTNKEKSAVFGVLPPEKTGIAIFNHNAFVDCDYFDMFSDIRDLSVARGLSKNVFDLKTFIKFD INYLYKKFIYILGNSSHNNPYLNMAKNSIDKQKSWLYIHEANLNNLLFSHCNGNFLTMKQYLIEHYPEFNSELIELKNFQ EFKIWNEELKIYSLRVIVGLTNIFNFIVNNSLCKNLVLKELKDCKVNIIEAFLPLPKIVNISHSGLDKKNSQFYIGAFGV PHELKFSLEIVQAIEYLNEYKNMSIKLLVVGYGANDFFKKYDFNKSYLEIYENVSDTQFYDLIKEVDLVIQLRKKPHGES SGPIVSALVLDKKIITSKDFLDKKIEDKVFVLDNHELDYKKIAEKILECIQVSSNVVNYSEIKNSYTYSNLVKLLDEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55706; Mature: 55706
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIIVKVCKIPIFKTISDDNLKKYYLLGVLFLRIQIFKKSKKYSLFGLPILKLFYSDNI CHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCC SKFCNINQQQQTMEKLIGQLNKNDIVKESDFAFLKSRKTNKEKSAVFGVLPPEKTGIAIF HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCEEEE NHNAFVDCDYFDMFSDIRDLSVARGLSKNVFDLKTFIKFDINYLYKKFIYILGNSSHNNP ECCEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC YLNMAKNSIDKQKSWLYIHEANLNNLLFSHCNGNFLTMKQYLIEHYPEFNSELIELKNFQ EEEHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCEEHHHHHHHHHCCCCCHHHHHHCCCH EFKIWNEELKIYSLRVIVGLTNIFNFIVNNSLCKNLVLKELKDCKVNIIEAFLPLPKIVN HHHHHHCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC ISHSGLDKKNSQFYIGAFGVPHELKFSLEIVQAIEYLNEYKNMSIKLLVVGYGANDFFKK CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHH YDFNKSYLEIYENVSDTQFYDLIKEVDLVIQLRKKPHGESSGPIVSALVLDKKIITSKDF CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHH LDKKIEDKVFVLDNHELDYKKIAEKILECIQVSSNVVNYSEIKNSYTYSNLVKLLDEL HHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MQSIIVKVCKIPIFKTISDDNLKKYYLLGVLFLRIQIFKKSKKYSLFGLPILKLFYSDNI CHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCC SKFCNINQQQQTMEKLIGQLNKNDIVKESDFAFLKSRKTNKEKSAVFGVLPPEKTGIAIF HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCEEEE NHNAFVDCDYFDMFSDIRDLSVARGLSKNVFDLKTFIKFDINYLYKKFIYILGNSSHNNP ECCEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC YLNMAKNSIDKQKSWLYIHEANLNNLLFSHCNGNFLTMKQYLIEHYPEFNSELIELKNFQ EEEHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCEEHHHHHHHHHCCCCCHHHHHHCCCH EFKIWNEELKIYSLRVIVGLTNIFNFIVNNSLCKNLVLKELKDCKVNIIEAFLPLPKIVN HHHHHHCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC ISHSGLDKKNSQFYIGAFGVPHELKFSLEIVQAIEYLNEYKNMSIKLLVVGYGANDFFKK CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHH YDFNKSYLEIYENVSDTQFYDLIKEVDLVIQLRKKPHGESSGPIVSALVLDKKIITSKDF CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHH LDKKIEDKVFVLDNHELDYKKIAEKILECIQVSSNVVNYSEIKNSYTYSNLVKLLDEL HHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA