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The map label for this gene is aldR [H]

Identifier: 57238431

GI number: 57238431

Start: 1479781

End: 1480143

Strand: Direct

Name: aldR [H]

Synonym: CJE1579

Alternate gene names: 57238431

Gene position: 1479781-1480143 (Clockwise)

Preceding gene: 57238429

Following gene: 57238432

Centisome position: 83.24

GC content: 32.78

Gene sequence:

>363_bases
ATGTCAAACTATCCAAAGGCCATTGGTCCATACTCAGCTTACAGAGAAGTAAATGGACTTTTATTTATATCAGGACAACT
TCCTATCAACCCTGATTCAGGCGAAATAGAAAGCCATGATATCAAAGAACAAACCAAACAATCTTTGAAAAATATCGGTG
CTATCTTAGAAGAAAATGGTATCAGTTATGATAAAGTGGTTAAAACCACTTGCTTTTTAGCTGATATTAATGATTTTGTA
GCATTTAATGAAATTTATGCTGAATTTTTTAAAGCTCCTTATCCAGCAAGAAGTGCTTTTGCAGTAAAAGATCTACCAAA
AAAAGCTAAAGTAGAGATAGAGATCATCGCTCAAAAAGGATAA

Upstream 100 bases:

>100_bases
AAAAATAAAATTTTATTATTATGATAATAAACTATTGACAAATTATTATTGTAGTGATAAAATGCATTCTGCTTAATCTA
TATTTAACAAAGGAGAATTC

Downstream 100 bases:

>100_bases
AATATGCTAGGTATTGTTTTTTCTTTATTTAGTGTTTTTTTACTTGTTTTTATGCTTTATAAAAAAATCAATGCTCACAT
GGCACTGCTTTTAAGTGGTT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSNYPKAIGPYSAYREVNGLLFISGQLPINPDSGEIESHDIKEQTKQSLKNIGAILEENGISYDKVVKTTCFLADINDFV
AFNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIAQKG

Sequences:

>Translated_120_residues
MSNYPKAIGPYSAYREVNGLLFISGQLPINPDSGEIESHDIKEQTKQSLKNIGAILEENGISYDKVVKTTCFLADINDFV
AFNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIAQKG
>Mature_119_residues
SNYPKAIGPYSAYREVNGLLFISGQLPINPDSGEIESHDIKEQTKQSLKNIGAILEENGISYDKVVKTTCFLADINDFVA
FNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIAQKG

Specific function: Implicated in the regulation of isoleucine biosynthesis [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=116, Percent_Identity=49.1379310344828, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI87082396, Length=120, Percent_Identity=44.1666666666667, Blast_Score=106, Evalue=4e-25,
Organism=Escherichia coli, GI87082213, Length=118, Percent_Identity=43.2203389830509, Blast_Score=106, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI25148896, Length=119, Percent_Identity=47.0588235294118, Blast_Score=117, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71982075, Length=119, Percent_Identity=47.0588235294118, Blast_Score=117, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71982068, Length=119, Percent_Identity=47.0588235294118, Blast_Score=117, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320899, Length=102, Percent_Identity=45.0980392156863, Blast_Score=92, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6322138, Length=113, Percent_Identity=38.0530973451327, Blast_Score=88, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19921376, Length=119, Percent_Identity=38.655462184874, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13332; Mature: 13201

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYPKAIGPYSAYREVNGLLFISGQLPINPDSGEIESHDIKEQTKQSLKNIGAILEENG
CCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
ISYDKVVKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIAQKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SNYPKAIGPYSAYREVNGLLFISGQLPINPDSGEIESHDIKEQTKQSLKNIGAILEENG
CCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
ISYDKVVKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIAQKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335274; 11337471 [H]