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The map label for this gene is yajR [H]

Identifier: 57238419

GI number: 57238419

Start: 1467818

End: 1469119

Strand: Direct

Name: yajR [H]

Synonym: CJE1567

Alternate gene names: 57238419

Gene position: 1467818-1469119 (Clockwise)

Preceding gene: 57238417

Following gene: 57238421

Centisome position: 82.56

GC content: 30.65

Gene sequence:

>1302_bases
ATGCTAAATTATGTCTTACCCTTATCTTTCATAGTTGGAACAAGATTTTTTGGGCTGTTTATAGTTTTGCCAGTTTTAAG
TCTTTATGCTTTAAAACTTGAAGGTGCTAATGAATTTTTAGTGGGACTTTTAGTTGGTGTTTATGCCTTAACTCAAATGA
TTTTACAAGTGCCTTTTGGGATTTTAAGTGATAAAATTGGTCGTAAAAAAACCATGCTCATTGGACTGATTATTTTTATA
ATAGGCTCTTTAATCTGCTCTTTTGCGGAAAATATTTACACCATGCTTTTAGGAAGAATGCTCCAAGGTGCAGGAGCTAT
TGGAGCTGTGGCTACAGCAATGATAAGTGATTTTATCACAGAAGAAAATCGTGGTAAAGCCATGGCGGTAATGGGTTCTT
TTATAGGACTTAGTTTTGCAGCTTCTATGGTGATCTCTCCTTTAATGAGTGCAAAATGGGGTTTATCTAGCCTTTTTGAT
CTTAGTGCAGCTTTGTCTCTTTTATGTATAATTTTGCTTTATACTATTGTACCTAAAGAAAACAAAATCACTCATGAAAA
TGAAAAAACTCCTTTTTTTCATCTTATTAAACAAAAAAATTTAGCCCTTATGAATCTTACTAATTTCATGCAAAAAATGC
TTATGAGTATAGCATTTTTAAGCATTCCTATCATTCTAGTAAAACATTTAGGCTTTGCTTCTGATAAACTTTGGATTGTT
TATAGCGCTTCTATGGTAGCAGGTTTTATCGCTATGGGCTTTGCTGGAAGTTTAGGCGAAAAAAGAGGTTTAGCTAAACA
AATTTTACTCTTAGGAATTGTTTTTTTCATACTTGCTTATCTTTTTTTTACTTTTAGTAATTCTATAGATTTTTTTATCA
TAGCAGTTGTGATTTTTTTTATAGGTTTTAATTTACACGAGCCTATTATGCAAAGTTGTGCATCAAAATTTTGTAAAGTT
CATGAAAAAGGTGCGGCATTAGGGTTGTTTAATGCTTTTGGATATGGTGGAAGTTTTATAGGTGGTATTATCGGAGGGAC
ATTTTTACATCTAGATGCCTTAAATCTTTTAGCTATTATTTTAGTAATTTTAGCTCTAATTTGGCTTGTGGCATTATTTT
TCTTAAAAAATCCAGCTGATTTTAAAAACCTTTATCTACCTTTAGAAACACCTTTAAATTTCAGTACTTTTAGTGAAAAT
TTAGGGGTTGTAGATATTTATAAAAACTCTAAAAATCTTGTTGTTAAATTTGATAGCAAACTTACAAATAAAGAAGAATT
AGAAGGCAAAATTAAGATCTAA

Upstream 100 bases:

>100_bases
CTTTTAAATATCAAATGATAAAACGATGTTAATCAATGCTTAATCCATTTCATAGTAAAATTATCCTAATTTAAATTTCA
AATTTAATAGGAAATTGATA

Downstream 100 bases:

>100_bases
TTTTGCCCCGCAAAACCCATTGCTTTTATCATCACTTTTGCCTTGCAATCTGCACAACAATAAAGTGTTTTGATTTTATT
CTCATCATTACCAAATTTAG

Product: multidrug resistance efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MLNYVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLLVGVYALTQMILQVPFGILSDKIGRKKTMLIGLIIFI
IGSLICSFAENIYTMLLGRMLQGAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
LSAALSLLCIILLYTIVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIAFLSIPIILVKHLGFASDKLWIV
YSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFFILAYLFFTFSNSIDFFIIAVVIFFIGFNLHEPIMQSCASKFCKV
HEKGAALGLFNAFGYGGSFIGGIIGGTFLHLDALNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPLNFSTFSEN
LGVVDIYKNSKNLVVKFDSKLTNKEELEGKIKI

Sequences:

>Translated_433_residues
MLNYVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLLVGVYALTQMILQVPFGILSDKIGRKKTMLIGLIIFI
IGSLICSFAENIYTMLLGRMLQGAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
LSAALSLLCIILLYTIVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIAFLSIPIILVKHLGFASDKLWIV
YSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFFILAYLFFTFSNSIDFFIIAVVIFFIGFNLHEPIMQSCASKFCKV
HEKGAALGLFNAFGYGGSFIGGIIGGTFLHLDALNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPLNFSTFSEN
LGVVDIYKNSKNLVVKFDSKLTNKEELEGKIKI
>Mature_433_residues
MLNYVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLLVGVYALTQMILQVPFGILSDKIGRKKTMLIGLIIFI
IGSLICSFAENIYTMLLGRMLQGAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
LSAALSLLCIILLYTIVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIAFLSIPIILVKHLGFASDKLWIV
YSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFFILAYLFFTFSNSIDFFIIAVVIFFIGFNLHEPIMQSCASKFCKV
HEKGAALGLFNAFGYGGSFIGGIIGGTFLHLDALNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPLNFSTFSEN
LGVVDIYKNSKNLVVKFDSKLTNKEELEGKIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=439, Percent_Identity=32.5740318906606, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI48994889, Length=333, Percent_Identity=21.3213213213213, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47556; Mature: 47556

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHCCCCCCC
>Mature Secondary Structure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CCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]