| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238345
Identifier: 57238345
GI number: 57238345
Start: 1383781
End: 1385097
Strand: Direct
Name: 57238345
Synonym: CJE1487
Alternate gene names: NA
Gene position: 1383781-1385097 (Clockwise)
Preceding gene: 57238344
Following gene: 57238346
Centisome position: 77.84
GC content: 35.46
Gene sequence:
>1317_bases GTGGATAAGCTAGACTTTAGAAGCCAAGATTTTAGCCAAACTGGAAAGGCTATGTATGAACTAGCTTGTGAACTTTTTCC TATCCCTAGAAGTATCACAGGGCAAGGTTTTAGAGATAGCTTAGAAATTTTAAATAAAACTCTGGGCGGGGGGGGGGGGG GGATACTCAAATTTCACTCTATAAAAAGTGGTACAAAGGTTTTTGACTGGATAGTCCCTGATGAATGGAACGCCAAAGAA GCCTATATCATCACTCCAGAAGGAGAAAAAATTTGTGATTTTAAAAAGCATAATCTACACCTTCTAAACTATAGCGAAGC TATCGATAAAGAAATCGAACTAGAAGAACTTCAAGATCATCTTTACTCCATAGAAGAAATGCCCGATGCTATTCCTTATG TAACGAGTTATTACAAAAGGCGTTGGGGATTTTGTCTCACGCATAATGAAAGAAAAAAACTTAAAAAAGGCAAATACAAA GTTTATATCGATGCAAAACATGATGAAAATGGGGTTTTGGACTATGCTGATTTTATCCTACCTAGTACGCAAAATTCAAA AGATGAAATTTTAATTTCAACCTATCTTTGTCATCCTTCCATGGCAAATAACGAGCTTAGTGGCCCTGTGGTGGCTATTT TCCTAGCAAAATGGCTTTTGGGTTTAAAAGAAAGAAAATATAATTACCGCTTTGTCATCATCCCTGAAACCATAGGGTCT ATAGTCTATCTTAGCAAACATTTAGAGCATTTAAAAAAATATGTTAAAGCAGGCTTTGTGCTTTCTTGCTTAGGCGATGA TCATGCTTACTCACTCATACATACACCTAAAGAAAACACTCTAAGCGATAAAGTTGCCTTGCATACGCTTAAAAATAAAG AAAATTTCAAAGCTTTTAGTTTTTTGGATCGCGGAAGCGATGAAAGACAATACAATGCTCCGCTTGTAAATCTTGGCATT GTAGGAGTATGTCGCACAAGATACCTAGAATACGAACAATACCACACCAGCAAAGATAATCTCAATTTTATCTCTGAAAA AGGTTTAATGGGTGGACTTCAAAGCATGCAAGAAATGATTTTAAATCTAGAAATCAACGCCGTATATAAAAACACCATAG TATGCGAGCCCAATCTTGGCAAAAGAGGACTATATCATACCCTTAGCACTGCCAATGACATTCCTTTAGCTTGTAATTTT CTAGCTTACTGTGATGGAGAGAATGATATCATCGATATAGCCAATATCTTAAATATGCAAGCTTATGAATTTAAAGAACT TTTGAAAAAAATAAAATTTTATGGACTAGTAAAATGA
Upstream 100 bases:
>100_bases GAGCTTAGCATACCTTGTCATCAAGAAATGAATCTAAAAGATGCAAAATTTGTCAAAGATACTTTATTTAGCATTCTTGA AAAAGTTAAAAAGGGATATT
Downstream 100 bases:
>100_bases AATATTTTTTAGAACACAATGACAAAAAATACTCCGATAAGGATTTAATAGATGCTTTTTATCAACTAGGTATAAAAAGA GGCGATATTTTATGTGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRDSLEILNKTLGGGGGGILKFHSIKSGTKVFDWIVPDEWNAKE AYIITPEGEKICDFKKHNLHLLNYSEAIDKEIELEELQDHLYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYK VYIDAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLGLKERKYNYRFVIIPETIGS IVYLSKHLEHLKKYVKAGFVLSCLGDDHAYSLIHTPKENTLSDKVALHTLKNKENFKAFSFLDRGSDERQYNAPLVNLGI VGVCRTRYLEYEQYHTSKDNLNFISEKGLMGGLQSMQEMILNLEINAVYKNTIVCEPNLGKRGLYHTLSTANDIPLACNF LAYCDGENDIIDIANILNMQAYEFKELLKKIKFYGLVK
Sequences:
>Translated_438_residues MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRDSLEILNKTLGGGGGGILKFHSIKSGTKVFDWIVPDEWNAKE AYIITPEGEKICDFKKHNLHLLNYSEAIDKEIELEELQDHLYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYK VYIDAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLGLKERKYNYRFVIIPETIGS IVYLSKHLEHLKKYVKAGFVLSCLGDDHAYSLIHTPKENTLSDKVALHTLKNKENFKAFSFLDRGSDERQYNAPLVNLGI VGVCRTRYLEYEQYHTSKDNLNFISEKGLMGGLQSMQEMILNLEINAVYKNTIVCEPNLGKRGLYHTLSTANDIPLACNF LAYCDGENDIIDIANILNMQAYEFKELLKKIKFYGLVK >Mature_438_residues MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRDSLEILNKTLGGGGGGILKFHSIKSGTKVFDWIVPDEWNAKE AYIITPEGEKICDFKKHNLHLLNYSEAIDKEIELEELQDHLYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYK VYIDAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLGLKERKYNYRFVIIPETIGS IVYLSKHLEHLKKYVKAGFVLSCLGDDHAYSLIHTPKENTLSDKVALHTLKNKENFKAFSFLDRGSDERQYNAPLVNLGI VGVCRTRYLEYEQYHTSKDNLNFISEKGLMGGLQSMQEMILNLEINAVYKNTIVCEPNLGKRGLYHTLSTANDIPLACNF LAYCDGENDIIDIANILNMQAYEFKELLKKIKFYGLVK
Specific function: Unknown
COG id: COG4310
COG function: function code R; Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50186; Mature: 50186
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRDSLEILNKTLGGGGGGILKFHS CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE IKSGTKVFDWIVPDEWNAKEAYIITPEGEKICDFKKHNLHLLNYSEAIDKEIELEELQDH CCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHH LYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYIDAKHDENGVLDYADFIL HHHHHHCCCHHHHHHHHHHHHCCEEEECCHHHHHCCCCEEEEEECCCCCCCCEEHHHHHC PSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLGLKERKYNYRFVIIPETIGS CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH IVYLSKHLEHLKKYVKAGFVLSCLGDDHAYSLIHTPKENTLSDKVALHTLKNKENFKAFS HHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHH FLDRGSDERQYNAPLVNLGIVGVCRTRYLEYEQYHTSKDNLNFISEKGLMGGLQSMQEMI HHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHH LNLEINAVYKNTIVCEPNLGKRGLYHTLSTANDIPLACNFLAYCDGENDIIDIANILNMQ HCEEEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCEEHHHHHHCCH AYEFKELLKKIKFYGLVK HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRDSLEILNKTLGGGGGGILKFHS CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE IKSGTKVFDWIVPDEWNAKEAYIITPEGEKICDFKKHNLHLLNYSEAIDKEIELEELQDH CCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHH LYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYIDAKHDENGVLDYADFIL HHHHHHCCCHHHHHHHHHHHHCCEEEECCHHHHHCCCCEEEEEECCCCCCCCEEHHHHHC PSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLGLKERKYNYRFVIIPETIGS CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH IVYLSKHLEHLKKYVKAGFVLSCLGDDHAYSLIHTPKENTLSDKVALHTLKNKENFKAFS HHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHH FLDRGSDERQYNAPLVNLGIVGVCRTRYLEYEQYHTSKDNLNFISEKGLMGGLQSMQEMI HHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHH LNLEINAVYKNTIVCEPNLGKRGLYHTLSTANDIPLACNFLAYCDGENDIIDIANILNMQ HCEEEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCEEHHHHHHCCH AYEFKELLKKIKFYGLVK HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA