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The map label for this gene is yfbE [C]

Identifier: 57238344

GI number: 57238344

Start: 1382658

End: 1383788

Strand: Direct

Name: yfbE [C]

Synonym: CJE1486

Alternate gene names: 57238344

Gene position: 1382658-1383788 (Clockwise)

Preceding gene: 57238343

Following gene: 57238345

Centisome position: 77.77

GC content: 33.86

Gene sequence:

>1131_bases
ATGCTTACTTATTCTCATCAAAACATCGATCAAAGCGATATAGATGCGCTTACAAAAGCTTTAAAAGATGAAATTTTAAC
AGGGGGTAAAAAGGTAGATGAATTTGAAGAAGCCCTTTGTGAATATGTGGGCGTAAAACACGCTTGTGTATTAAACTCAG
CCACTTCAGCCCTTCATCTTGCCTATACAGCACTAGGCATCAAAGAAAAAATCGTTTTAACCACTCCTTTAACCTTCGCT
GCTACGGCTAATGCGGCCTTAATAGCTGGAGCTAAGGTAGAGTTTATCGACATTAAAAACGATGGCAATATTGATGAAAA
AAAACTAGAAGCAAGACTTTTAAAAGATAGTAAAAATATAGGAGCTATTAGCGTGGTGGATTTTGGGGGAAATAGCGTTG
AAATAGATGAAATTTCAAGCCTTGCTAAAAAATACAATATCCCTTTAATCGATGATGCAAGCCATGCTTTAGGTGCTTTG
TATAAAAGTGAAAAAGTAGGAAAAAAAGCCGATCTTTCTATATTTTCTTTTCACCCTGTTAAGCCTATCACTACTTTTGA
AGGTGGGGCTGTGGTGAGTGATAATGAAGAGCTTATCGATAAAATCAAGCTTTTAAGAAGCCATGGTATTGTTAAAAAAA
GGCTTTGGGATAGCGATATGGTAGAACTTGGCTATAATTACCGCTTAAGTGATGTTGCTTGTGCTTTAGGGATAAACCAG
CTTAAAAAACTCGATCATAATCTTGAAAAAAGAGAAGAAATCGCAAGTTTTTACGATAAAGAATTTGAAAAAAATCCTTA
TTTTTCCACGATAAAAATCAAAAATTATAAAAAAAGCTCAAGACATTTATATCCTATCTTGCTTTTTCCTGAATTTTATT
GTCAAAAAGAAGAGCTTTTTGAAAGCTTGCTTCATGCAGGAGTTGGTGTACAGGTGCATTACAAACCTACTTATGAGTTT
AGTTTTTATAAAAAACTCTTAGGGGAAATCAAACTCCAAAATGCGGATAATTTTTACAAAGCCGAGCTTAGCATACCTTG
TCATCAAGAAATGAATCTAAAAGATGCAAAATTTGTCAAAGATACTTTATTTAGCATTCTTGAAAAAGTTAAAAAGGGAT
ATTGTGGATAA

Upstream 100 bases:

>100_bases
AAGGTAAAAGATGGTTTTTCTTATAGTTCGGATAATAATCCTTTATGGACAAGCGAAAAAGAACTTTTAGAAATCATCAA
TCACACCGAAGGTTTTTAAA

Downstream 100 bases:

>100_bases
GCTAGACTTTAGAAGCCAAGATTTTAGCCAAACTGGAAAGGCTATGTATGAACTAGCTTGTGAACTTTTTCCTATCCCTA
GAAGTATCACAGGGCAAGGT

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVGVKHACVLNSATSALHLAYTALGIKEKIVLTTPLTFA
ATANAALIAGAKVEFIDIKNDGNIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDSDMVELGYNYRLSDVACALGINQ
LKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNYKKSSRHLYPILLFPEFYCQKEELFESLLHAGVGVQVHYKPTYEF
SFYKKLLGEIKLQNADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG

Sequences:

>Translated_376_residues
MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVGVKHACVLNSATSALHLAYTALGIKEKIVLTTPLTFA
ATANAALIAGAKVEFIDIKNDGNIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDSDMVELGYNYRLSDVACALGINQ
LKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNYKKSSRHLYPILLFPEFYCQKEELFESLLHAGVGVQVHYKPTYEF
SFYKKLLGEIKLQNADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG
>Mature_376_residues
MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVGVKHACVLNSATSALHLAYTALGIKEKIVLTTPLTFA
ATANAALIAGAKVEFIDIKNDGNIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDSDMVELGYNYRLSDVACALGINQ
LKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNYKKSSRHLYPILLFPEFYCQKEELFESLLHAGVGVQVHYKPTYEF
SFYKKLLGEIKLQNADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=375, Percent_Identity=29.6, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI2367285, Length=269, Percent_Identity=27.5092936802974, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42239; Mature: 42239

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVGVKHACVLNSATSALHL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHEECCCHHHHHHH
AYTALGIKEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDGNIDEKKLEARLLKDSKNI
HHHHHCCCCEEEEECCCHHHHCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCC
GAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGALYKSEKVGKKADLSIFSFHPV
CEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC
KPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDSDMVELGYNYRLSDVACALGINQ
CCEEECCCCEEECCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH
LKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNYKKSSRHLYPILLFPEFYCQKEELF
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCHHHCCHHHHH
ESLLHAGVGVQVHYKPTYEFSFYKKLLGEIKLQNADNFYKAELSIPCHQEMNLKDAKFVK
HHHHHCCCCEEEEECCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHH
DTLFSILEKVKKGYCG
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVGVKHACVLNSATSALHL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHEECCCHHHHHHH
AYTALGIKEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDGNIDEKKLEARLLKDSKNI
HHHHHCCCCEEEEECCCHHHHCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCC
GAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGALYKSEKVGKKADLSIFSFHPV
CEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC
KPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDSDMVELGYNYRLSDVACALGINQ
CCEEECCCCEEECCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH
LKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNYKKSSRHLYPILLFPEFYCQKEELF
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCHHHCCHHHHH
ESLLHAGVGVQVHYKPTYEFSFYKKLLGEIKLQNADNFYKAELSIPCHQEMNLKDAKFVK
HHHHHCCCCEEEEECCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHH
DTLFSILEKVKKGYCG
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]