| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238339
Identifier: 57238339
GI number: 57238339
Start: 1378255
End: 1379070
Strand: Direct
Name: 57238339
Synonym: CJE1481
Alternate gene names: NA
Gene position: 1378255-1379070 (Clockwise)
Preceding gene: 57238334
Following gene: 57238342
Centisome position: 77.52
GC content: 27.94
Gene sequence:
>816_bases ATGAAAAAAATTTTATTAAGTTTTGCATTTTTTGCAAGTTTAGCTAGTGCAAATACCATTAATGCTATAGCTGTAGTTGT AGACAAAGAGCCTATCACAACTTATGATATAGATCAAACTATGAAAGTACTTAAAATTGATAGAAATAAAGCTTTAGGCG TACTCATCAATGAAAAAATGGAAATTTCACAAATGAAACAACTAGGTATTGTAGTCAATGATCTAGAGCTTGATGATGCT ATAAATAAAATGCTTGCTCAAAACAAAACGACTTTAAATGCTTTCAAAGCAAATTTAAAATCCAAAAATCAAAGCTATGA ACAATTTCGTGCAAATTTTAAAAAAGACTTAGAAAAAAGAAAGCTTTATGAAAAAATCGCAAGTATGGCAAAAACTGATT TTAGTGATGATGGAGCAAAAAAATTTTTCGAACAAAATAAAGATAAATTCACTTTTTATACACAAATTAATGCAAATATT TATCTATCAAACAATCCTCAAACTTTAGAAAATATCAAAAATACAAAAAAAACAATCCTTAAACCACAAAATGCATCTTT AAACACAAGTAATGCCGATCCAAGACTTTTAGGGCTTTTATCACAAATTCCTGTTGGAGGCTTTTCCCCTGTTTTAAATG GAAAAAATGGCTATGAACTCTATGAAGTTAAAAGCAGAGATGGGGCACAAACTCCTGAATATGAACAAGTTAAAAATGAA GTTTTAAACGCTTATGTAAGTGAACAAAGACAAAATTTTATACAGGATTATTTTGATAAACTCCGCTCTAAAATCAATAT AGAATATTTAAGATAA
Upstream 100 bases:
>100_bases GCTTGGAGCAAAACGCGTTGTAAGTTTTTCGTGCATTTTTTGCCTTTTCTTAAATTTTTATTGATATAATGCGATATTTA TACTTAAATAAAGGTTTGAA
Downstream 100 bases:
>100_bases AAATTACAATTAAAATTTCCCTTTAATAGGGAAATTTTAATGTCTTGCAAGATAATTTGTATCGTAATTATTATTAATAA AATCAGGATTTTCCATCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDA INKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANI YLSNNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGYELYEVKSRDGAQTPEYEQVKNE VLNAYVSEQRQNFIQDYFDKLRSKINIEYLR
Sequences:
>Translated_271_residues MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDA INKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANI YLSNNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGYELYEVKSRDGAQTPEYEQVKNE VLNAYVSEQRQNFIQDYFDKLRSKINIEYLR >Mature_271_residues MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDA INKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANI YLSNNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGYELYEVKSRDGAQTPEYEQVKNE VLNAYVSEQRQNFIQDYFDKLRSKINIEYLR
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30968; Mature: 30968
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRNKALGVLINEKM CHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECHHHHHHHHHCCCCCCEEEEECCCH EISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDLEKR HHHHHHHHCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKKTIL HHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHC KPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGYELYEVKSRDGAQTPEYEQVKNE CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH VLNAYVSEQRQNFIQDYFDKLRSKINIEYLR HHHHHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRNKALGVLINEKM CHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECHHHHHHHHHCCCCCCEEEEECCCH EISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDLEKR HHHHHHHHCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKKTIL HHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHC KPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGYELYEVKSRDGAQTPEYEQVKNE CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH VLNAYVSEQRQNFIQDYFDKLRSKINIEYLR HHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA