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The map label for this gene is dcd [H]

Identifier: 57238342

GI number: 57238342

Start: 1381043

End: 1381603

Strand: Direct

Name: dcd [H]

Synonym: CJE1484

Alternate gene names: 57238342

Gene position: 1381043-1381603 (Clockwise)

Preceding gene: 57238339

Following gene: 57238343

Centisome position: 77.68

GC content: 34.05

Gene sequence:

>561_bases
ATGGGCTTAAAAGCGGATAATTGGATAAGAAAAATGGCATTAGAACACAAGATGATCGAACCATTTTGCGAAGCAAATAT
AGGAAAAGGTGTGGTAAGCTATGGACTTTCAAGCTATGGTTATGATATACGCGTAGGACGTGAGTTTAAAATTTTTACCA
ATGTTAATTCAACTGTAGTGGATCCAAAAAATTTCGTAGAAGAAAATGTAGTAGATTTTGAAGGTGATGTATGTATAGTT
CCTGCAAATTCTTTTACCCTAGCTAGAACTATAGAGTATTTTAAAATGCCTGATGATGTCTTAGCTATTTGTCTTGGCAA
AAGCACTTATGCAAGATGTGGTATCATCGTCAATGTTACCCCTTTTGAACCAGGTTTTGAAGGACATATTACTATAGAAA
TTTCAAATACTACGCCTTTACCTGCAAAAATTTATGCTAATGAAGGCATAGCACAAGTGTTGTTTTTACAAGGTGATGAA
AAATGTGACACCACTTATAAAGATAAAAAAGGCAAGTATCAAGCTCAAACAGGCATAACCTTGCCAAGAATTTTAAAATA
G

Upstream 100 bases:

>100_bases
AAACTTGAAATTTAACTTTAAAAAAGAAAAAAATCATAAAAAATATAGATTTTTTAGGTTATAATCCTTACAAACAATTA
CAAATATTAAAAGGTTAAAA

Downstream 100 bases:

>100_bases
GAACACTTGTTGCTTTAATTTTAAAAAACTTAAGCAAAGGAAGGCAAAATGTTTAACAAAAAAAATATCTTAATCACAGG
CGGAACAGGCTCTTTTGGAA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIRVGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIV
PANSFTLARTIEYFKMPDDVLAICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
KCDTTYKDKKGKYQAQTGITLPRILK

Sequences:

>Translated_186_residues
MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIRVGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIV
PANSFTLARTIEYFKMPDDVLAICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
KCDTTYKDKKGKYQAQTGITLPRILK
>Mature_185_residues
GLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIRVGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVP
ANSFTLARTIEYFKMPDDVLAICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDEK
CDTTYKDKKGKYQAQTGITLPRILK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 20730; Mature: 20599

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIRVGREFKIFTNVNSTVV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHCCEEEEECCEEEEEECCCCEEE
DPKNFVEENVVDFEGDVCIVPANSFTLARTIEYFKMPDDVLAICLGKSTYARCGIIVNVT
CHHHHHHHCCCCCCCCEEEEECCCEEHHHHHHHHCCCHHHEEEEECCCCHHHCEEEEEEC
PFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDEKCDTTYKDKKGKYQAQTGIT
CCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCC
LPRILK
CHHHCC
>Mature Secondary Structure 
GLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIRVGREFKIFTNVNSTVV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHCCEEEEECCEEEEEECCCCEEE
DPKNFVEENVVDFEGDVCIVPANSFTLARTIEYFKMPDDVLAICLGKSTYARCGIIVNVT
CHHHHHHHCCCCCCCCEEEEECCCEEHHHHHHHHCCCHHHEEEEECCCCHHHCEEEEEEC
PFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDEKCDTTYKDKKGKYQAQTGIT
CCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCC
LPRILK
CHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA