| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is gltX [H]
Identifier: 57238338
GI number: 57238338
Start: 1376799
End: 1378190
Strand: Reverse
Name: gltX [H]
Synonym: CJE1480
Alternate gene names: 57238338
Gene position: 1378190-1376799 (Counterclockwise)
Preceding gene: 57238340
Following gene: 57238337
Centisome position: 77.52
GC content: 33.48
Gene sequence:
>1392_bases ATGCACGAAAAACTTACAACGCGTTTTGCTCCAAGCCCAACAGGGTATTTGCACATAGGTGGACTTAGAACAGCTCTTTA TAATTATTTATACGCTAGAAAAAATGGTGGAAATTTTTTACTTCGTATCGAAGATACGGATTTAAAAAGAAATTCCAAAG AAGCTACTAAAGCAATTATCGAAGCTTTTAAATGGTGCGGTTTAGAACATGATGGAGAAGTAACTTACCAATCAGAGCGT TTTGATCTTTATAAAGAATATGTTAAAAAGCTTTTAGATGAAGGCAAGGCGTATTATTGTTATATGAGTAAAGAAGAATT AGAAGAATTGCGCGCCAAGCAAGAAGCTGCCAAAGAGCGCCCAAGATATGATGGAAGATATAGAGAATTTACAGGCACGC CACCTCAGGGTATAGAGCCTGTTGTGCGTATTAAAGCACCTCAAAGCGGTGAGATTGTTTTTAAAGATGGGGTTAAAGGC GAGGTGAGATTTAAAGCAGAGGATATAATGGATGATTTTATCATTGCAAGAAGTGATGGAACTCCAACTTATAATTTTAC TGTTGTTATTGATGATGCTTTAATGGGGGTAAGTGATGTGATTCGCGGAGATGATCATCTTTCAAATACTCCTAAACAAA TTGTGCTTTATGAGGCATTGGGTTTTAAAATTCCTAAATTTTTTCATGTGGCTATGATACATGGAGAAGATGGTAAAAAG CTTTCAAAAAGACATGGGGCAACTGATGTTATGGAATACAAAGAAATGGGAATTTTACCTCAAGCTTTGCTTAATTTTCT TGTGCGTTTAGGTTGGAGCCATGGTGATGATGAGGTTTTTTCATTAGAAGATTTGAAAAAACTTTTTGACCCTTATCATA TTAATAAAAGCGCATCTTGTTATAATGCTAAAAAGCTTGAATGGCTTAACGCTCATTATATTAAAACTTTGCCTTTTGAA GAGATTAACCGTCAGCTTAAGGATCTTGGCTTTGATTTATCTGTTTATGAAAAGGCAGGATTTTTACTTGATTTATTAAG AGAGCGTGCAAAAACCTTGCATGATATTATCAATGGTGCAAAAAGTATAGTTAATGCGCCGCAAAATTATGATGAAAATG CAGTACAAAAATTTATTAACAAAAATAATTTAGAATTGCTCCAAGCATTTGCTAATACACTTAAAGATCAAAAAACAGGT AAAGATTTTGAAGATTTTACAAATGATTTTTTAGAAAAAAAAGAAGCAAAGTTAAAAGATTTGGCTCAGCCTATACGCAT AGCTTTAACAGGGAGTGCGGTAAGTCCTAGTATTTTTGAAGTATTAGAATTTTTAGAGGTTGATGAGTGCAAAAAAAGAA TAGAAAATTTTTTAAAAGTTAGAGGAAAATAA
Upstream 100 bases:
>100_bases TGCAAAAAATGCAAAACTTAATAAAATTTTTTTCATTTCAAACCTTTATTTAAGTATAAATATCGCATTATATCAATAAA AATTTAAGAAAAGGCAAAAA
Downstream 100 bases:
>100_bases AATGAATTTAAAAGAAGAAGCTTTAAAATACCATTTAGGTGGGAAAATTGATATTGTACCAAGTAAGCCAATGGCTACAA GCCATGATCTATCTTTGGCG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1 [H]
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIEDTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSER FDLYKEYVKKLLDEGKAYYCYMSKEELEELRAKQEAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFKDGVKG EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYEALGFKIPKFFHVAMIHGEDGKK LSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGDDEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFE EINRQLKDLGFDLSVYEKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFINKNNLELLQAFANTLKDQKTG KDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLEVDECKKRIENFLKVRGK
Sequences:
>Translated_463_residues MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIEDTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSER FDLYKEYVKKLLDEGKAYYCYMSKEELEELRAKQEAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFKDGVKG EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYEALGFKIPKFFHVAMIHGEDGKK LSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGDDEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFE EINRQLKDLGFDLSVYEKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFINKNNLELLQAFANTLKDQKTG KDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLEVDECKKRIENFLKVRGK >Mature_463_residues MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIEDTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSER FDLYKEYVKKLLDEGKAYYCYMSKEELEELRAKQEAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFKDGVKG EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYEALGFKIPKFFHVAMIHGEDGKK LSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGDDEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFE EINRQLKDLGFDLSVYEKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFINKNNLELLQAFANTLKDQKTG KDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLEVDECKKRIENFLKVRGK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=487, Percent_Identity=29.9794661190965, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI62241042, Length=259, Percent_Identity=25.8687258687259, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI4826960, Length=293, Percent_Identity=23.2081911262799, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1788743, Length=442, Percent_Identity=44.5701357466063, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI226510925, Length=278, Percent_Identity=35.2517985611511, Blast_Score=161, Evalue=1e-40, Organism=Escherichia coli, GI1786895, Length=207, Percent_Identity=29.4685990338164, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71993394, Length=491, Percent_Identity=32.5865580448065, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17511007, Length=236, Percent_Identity=25.4237288135593, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17543332, Length=118, Percent_Identity=32.2033898305085, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324540, Length=490, Percent_Identity=35.1020408163265, Blast_Score=262, Evalue=7e-71, Organism=Saccharomyces cerevisiae, GI6321192, Length=245, Percent_Identity=27.7551020408163, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6324742, Length=307, Percent_Identity=27.0358306188925, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24665321, Length=476, Percent_Identity=32.3529411764706, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI17864488, Length=230, Percent_Identity=27.3913043478261, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 53158; Mature: 53158
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIEDTDLKRNSKEATKAII CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHH EAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYMSKEELEELRAKQEAAKER HHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHC PRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFKDGVKGEVRFKAEDIMDDFIIARSDG CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEHHHHHHHHEEEECCC TPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYEALGFKIPKFFHVAMIHGEDGKK CCCEEEEEEECCHHHHHHHHHCCCCCCCCCCHHEEEEHHHCCCCCCEEEEEEEECCCCHH LSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGDDEVFSLEDLKKLFDPYHINKSASC HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECHHHHHHHHCCCCCCCCCCC YNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLSVYEKAGFLLDLLRERAKTLHDIINGA CCCHHHHHHCCHHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSIVNAPQNYDENAVQKFINKNNLELLQAFANTLKDQKTGKDFEDFTNDFLEKKEAKLKD HHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LAQPIRIALTGSAVSPSIFEVLEFLEVDECKKRIENFLKVRGK HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIEDTDLKRNSKEATKAII CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHH EAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYMSKEELEELRAKQEAAKER HHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHC PRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFKDGVKGEVRFKAEDIMDDFIIARSDG CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEHHHHHHHHEEEECCC TPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYEALGFKIPKFFHVAMIHGEDGKK CCCEEEEEEECCHHHHHHHHHCCCCCCCCCCHHEEEEHHHCCCCCCEEEEEEEECCCCHH LSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGDDEVFSLEDLKKLFDPYHINKSASC HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECHHHHHHHHCCCCCCCCCCC YNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLSVYEKAGFLLDLLRERAKTLHDIINGA CCCHHHHHHCCHHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSIVNAPQNYDENAVQKFINKNNLELLQAFANTLKDQKTGKDFEDFTNDFLEKKEAKLKD HHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LAQPIRIALTGSAVSPSIFEVLEFLEVDECKKRIENFLKVRGK HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA