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The map label for this gene is yrbE [H]

Identifier: 57238293

GI number: 57238293

Start: 545992

End: 546858

Strand: Reverse

Name: yrbE [H]

Synonym: CJE0611

Alternate gene names: 57238293

Gene position: 546858-545992 (Counterclockwise)

Preceding gene: 57238292

Following gene: 57238294

Centisome position: 30.76

GC content: 29.18

Gene sequence:

>867_bases
ATGAAAATAGGTATCATAGGCCTTGGAAAAATGGGGCAAAACCACTTAAATGAACTTAGTAAAAATTCTCATTTTAAACT
TAATGCACTTTTTGATCTTTGCAAAAATCCAAACCTAAATATTTTTGATGATATTTTTTATGATGATCTGGATAAATTTT
TAAATCAAAATAATGATATTATCATCATAGCAACACCTACAAATTCACATTTAACAATAGCAAAAAAAGTTTTTAAACAA
TGCAAATGCGTTTTAATCGAAAAGCCTTTAGCTCTAAATTTAAAAGAAATAGACGAAATTTCAAATTTAGCTAAAGAATA
CAGCATAAAAGTAGGTGTAGGTTTTTGCGAAAGATTTAATCCTGCGGTTTTAGCCCTAAAAAAAGAGCTTGAAAATGAAG
AAATTATCAGCATTAACATACAAAGATTTTCACCCTACCCACAAAGAATCAGCGATGTAGGGATTTTGCAAGATTTGGCT
GTGCATGATCTTGATTTGCTTTGTTTTTTAAGCAAACAAGAAATAACAAAAACCAATTTGCTTAAAAAATACACCCAAGA
TCAAACAAGAGAAAGTGAAAGCATTATTCTATGTGAGCTTGAAAAATGTATTGCTAGCATACATCAAAGTTGGAATAGCA
CACAAAAACTAAGAAAAATTCATCTTATTACTAAAAATCATTTTTATGAAGCCAATTTAAATGACTTTTCTTTATTAAAA
GATGGAAATTTTATAGAACTTACTCAACAAAGTCCACTTTTTTCAGAACACGAAGCTTTGTTAAAACTTATCGATAATCA
ACCCAATCATTTAGCCAGCACGAGCGATGCTTACAAAGTTCAAGAAATTTTAGAAAGGTTTGCGTGA

Upstream 100 bases:

>100_bases
TCAGAATACGCAAGCGAACACATCTTATCTTTGCCTTTTTCACCTTTTTTAAGTGAAGAAGAGCAAGAGCAAGTTATTTG
TATTTTTAAAGATTGATTCC

Downstream 100 bases:

>100_bases
AATTAGTTTTATTTTTAAATATGGGCGGAGCTACGAATTTACAAGATTGTGAAGTTTTTTTAAAAAATATGTTTAATGAT
CCTTATATTTTAGGAATCAA

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDDIFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQ
CKCVLIEKPLALNLKEIDEISNLAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLRKIHLITKNHFYEANLNDFSLLK
DGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSDAYKVQEILERFA

Sequences:

>Translated_288_residues
MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDDIFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQ
CKCVLIEKPLALNLKEIDEISNLAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLRKIHLITKNHFYEANLNDFSLLK
DGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSDAYKVQEILERFA
>Mature_288_residues
MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDDIFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQ
CKCVLIEKPLALNLKEIDEISNLAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLRKIHLITKNHFYEANLNDFSLLK
DGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSDAYKVQEILERFA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 33045; Mature: 33045

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDDIFYDDLDKFLNQNNDI
CEEEEEECCCCCHHHHHHHHCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE
IIIATPTNSHLTIAKKVFKQCKCVLIEKPLALNLKEIDEISNLAKEYSIKVGVGFCERFN
EEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECHHHHHCC
PAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLAVHDLDLLCFLSKQEITKTNL
HHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH
LKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLRKIHLITKNHFYEANLNDFSLLK
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHEEECCCEEECCCCCEEEEC
DGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSDAYKVQEILERFA
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDDIFYDDLDKFLNQNNDI
CEEEEEECCCCCHHHHHHHHCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE
IIIATPTNSHLTIAKKVFKQCKCVLIEKPLALNLKEIDEISNLAKEYSIKVGVGFCERFN
EEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECHHHHHCC
PAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLAVHDLDLLCFLSKQEITKTNL
HHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH
LKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLRKIHLITKNHFYEANLNDFSLLK
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHEEECCCEEECCCCCEEEEC
DGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSDAYKVQEILERFA
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]