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The map label for this gene is degT [H]

Identifier: 57238292

GI number: 57238292

Start: 546863

End: 547936

Strand: Reverse

Name: degT [H]

Synonym: CJE0612

Alternate gene names: 57238292

Gene position: 547936-546863 (Counterclockwise)

Preceding gene: 57238288

Following gene: 57238293

Centisome position: 30.82

GC content: 32.5

Gene sequence:

>1074_bases
ATGAATTTTATCAATCTTCAAGCCCAATATCTCGCATACAAAGATGAAATCAATGCTGAAATTGAAAGCGTTTTATCAAG
CTCTTCTTTTATAGGCGGTACAAAGCTTAACGAATTTGAGCAAAATTTAGCTCATTTTTTAGGTGTTAAACACGCTATAG
GTTGTTCAAGTGGAACCAGTGCTTTATATCTTGCCTTAAGAACCTTAGATATTGGCAAAGATGATGAAGTTATAGTGCCT
AGTTTTACTTTCATAGCAACAGCTGAAGTTGTGGCCTTGGTAGGTGCAAAACCTGTTTTTGTAGATATAAATTTATCAAA
TTACAATCTTGATTTTGAAGCAGTGCAAAAAGCAATAACTCCAAAAACTAAAGCTGTTATAGTAGTGAGTATGTTTGGAC
AAATGAGTGATTTAAGGGCTTTAGAAGAAATTTTAAAAGATAAAAATATCACTTTGATCGAAGATGGTGCACAAAGTTTT
GGCGCAAGTTTCAAAGGAGAAAAATCCTGCTCTATAGCTAAAATTTCATGCACAAGCTTTTTTCCTTCGAAGCCTTTGGG
AGCTTATGGCGATGGCGGGGCTATTTTTTGCCATGATGATGAAATTGCTAAAAAAATAAGAATTTTACTCAATCACGGAC
AAACTCAGCGTTATAAACATGAATTTATAGGTATAAATGGACGCCTTGACACCTTACAAGCAGCGATTTTAAATGTTAAG
TTAAAATACCTAGAAAAAGAATTAGACAAAAGACAAAAATTAGCACAAATTTATAATGCAAATTTAAAAAACTGTCAAAT
TCCACAAATTAATCCAAATGCTTTTAGCGCTTATGCACAATACAGTGTTTTAGTTGAAGATAGAGCTAGTGTATTGCAAA
AATTTGAAAAAGCTAATATACCTTATGCTATACACTATCCAACCCCTTTGCATAAACAACCTTGCTTTAGTGAGTTTTCA
AATTTAGAACTTAAAAATTCAGAATACGCAAGCGAACACATCTTATCTTTGCCTTTTTCACCTTTTTTAAGTGAAGAAGA
GCAAGAGCAAGTTATTTGTATTTTTAAAGATTGA

Upstream 100 bases:

>100_bases
AAATTTTTATAAAAACATATCATACCAAAATTACTTTAAATTAAGTAAAACTAAAATACAATAAACATTTTTATTTAATT
TTATTTCTCTAAGGTTTTTT

Downstream 100 bases:

>100_bases
TTCCATGAAAATAGGTATCATAGGCCTTGGAAAAATGGGGCAAAACCACTTAAATGAACTTAGTAAAAATTCTCATTTTA
AACTTAATGCACTTTTTGAT

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGTKLNEFEQNLAHFLGVKHAIGCSSGTSALYLALRTLDIGKDDEVIVP
SFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAITPKTKAVIVVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGINGRLDTLQAAILNVK
LKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFSAYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFS
NLELKNSEYASEHILSLPFSPFLSEEEQEQVICIFKD

Sequences:

>Translated_357_residues
MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGTKLNEFEQNLAHFLGVKHAIGCSSGTSALYLALRTLDIGKDDEVIVP
SFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAITPKTKAVIVVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGINGRLDTLQAAILNVK
LKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFSAYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFS
NLELKNSEYASEHILSLPFSPFLSEEEQEQVICIFKD
>Mature_357_residues
MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGTKLNEFEQNLAHFLGVKHAIGCSSGTSALYLALRTLDIGKDDEVIVP
SFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAITPKTKAVIVVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGINGRLDTLQAAILNVK
LKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFSAYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFS
NLELKNSEYASEHILSLPFSPFLSEEEQEQVICIFKD

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=367, Percent_Identity=29.4277929155313, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI2367285, Length=354, Percent_Identity=30.225988700565, Blast_Score=137, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39728; Mature: 39728

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGTKLNEFEQNLAHFLGVKHAIGCSSGTS
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
ALYLALRTLDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAIT
HEEEEEEHCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHC
PKTKAVIVVSMFGQMSDLRALEEILKDKNITLIEDGAQSFGASFKGEKSCSIAKISCTSF
CCCCEEEEEEHHCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEECCC
FPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGINGRLDTLQAAILNVK
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHEEECCCCHHHHHHHHHHHH
LKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFSAYAQYSVLVEDRASVLQKFEKANI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHILSLPFSPFLSEEEQEQVICIFKD
CEEEECCCCCCCCCCHHHHHCCEECCCHHHHHHHEECCCCHHCCCCCCCCEEEEEEC
>Mature Secondary Structure
MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGTKLNEFEQNLAHFLGVKHAIGCSSGTS
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
ALYLALRTLDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAIT
HEEEEEEHCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHC
PKTKAVIVVSMFGQMSDLRALEEILKDKNITLIEDGAQSFGASFKGEKSCSIAKISCTSF
CCCCEEEEEEHHCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEECCC
FPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGINGRLDTLQAAILNVK
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHEEECCCCHHHHHHHHHHHH
LKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFSAYAQYSVLVEDRASVLQKFEKANI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHILSLPFSPFLSEEEQEQVICIFKD
CEEEECCCCCCCCCCHHHHHCCEECCCHHHHHHHEECCCCHHCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]