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The map label for this gene is ctpA [H]

Identifier: 57238286

GI number: 57238286

Start: 556188

End: 557522

Strand: Direct

Name: ctpA [H]

Synonym: CJE0618

Alternate gene names: 57238286

Gene position: 556188-557522 (Clockwise)

Preceding gene: 57238289

Following gene: 57238285

Centisome position: 31.28

GC content: 31.01

Gene sequence:

>1335_bases
ATGATGGAGCTTATTTTGAAAACAAAACGATTTTTTGCGGGTCTTGCAGGCTTTGCCACTACTTTTATTTTATGTCTATT
TTTAACAAGTCATTTACAAGCTAAAGTTGATCAAAAAGAAGAGCAGGTTCAAAAACGCCTAGAAGCTTTAGATAAGCTTA
CAAAAACTCTTGCTATAGTAGAGCAATACTATGTGGATGATCAAAATATCAGCGATTTGGTGGATAAATCTTTATCAGGG
CTTTTAAGCAATCTTGATGCGCATTCTTCTTTTTTAAATGAAAAAGATTTTAATGATATGAAAATTCAAACTAATGGTGA
ATTTGGCGGCCTTGGTATAACCGTAGGTATGAAAGATGGTGCTTTAACAGTTGTTTCTCCTATAGAAGGAACACCAGCAG
ATAAAGCAGGGATAAAATCAGGAGATATTATTTTAAAAATTAATGATGAGGCCACTTTAGGAATTAATCTCAATGATGCT
GTAGATAAAATGCGTGGTAAGCCAAAAACTCAAATCACTTTAACCATTTTTAGAAAAGGTGCAACAAAACCTTTTGATGT
TACACTTACAAGAGAAATTATTAAGATAGAAAGTGTTTATGCAAAAATGATAGAAAATGAAAACATTCTTTATCTTAGGG
TTACAAATTTTGATAAAAATGTTGTAGATGTGGCAAGTAAAGAACTTAAAAAATATCCTAATGTTAAAGGAGTTATTTTA
GATCTTAGAAATAATCCTGGTGGACTTTTAAATCAAGCCATAGGACTTGTAAATTTATTTGTAGATAAAGGTGTTATTGT
TTCTCAAAAAGGACGCATCGCAAGTGAAAATCAAGAATATAAAGCCGATCCTAAAAACAAAATTTCTAATGCTTCTTTGG
TTGTGCTTGTAAATGGTGGAAGTGCTAGTGCAAGTGAAATTGTAAGTGGAGCTTTACAAGATCTTAAACGCGGTGTTATT
GTGGGTGAAAATACTTTTGGAAAAGGTAGTGTTCAGCAAATCATACCTATTAATAAAACTGAAGCTTTAAGGCTTACTAT
TGCAAGATATTATCTTCCAAGCGGGCGTACTATTCAAGCAGTGGGTGTAAAACCTGATATTGAAGTTTTTCCAGGTAAAG
TAAATACTCAAGAAGATGGTTTTTCTATAAAAGAAAGCGACTTAAAACAACATTTAGAAAGTGAGCTTGAAAAAATAGAT
AAAAATAAAAAAGAAGATAAGCAAGAAAATAAAGACAATAAAAATCTAATCAGTCAAAAACAAATCAATGATGATGCACA
GTTAAATTCAGCTATTGATACTATTAAAATTTTAAATATCAAACAAGGACGATAA

Upstream 100 bases:

>100_bases
TAGTCTATTTTAACATATTTTTAAGAATTTAAATTTATTTACGAAGTTTTAAGCAATTTTTATTAAAATTTACTCTTTAA
ACTAATTAAACTAAAACTCA

Downstream 100 bases:

>100_bases
AATGACAAAAAAAGAAATGCTCTACGAAGGAAAAGGTAAAAAACTTTTCAAAACTGATGATGAAAATTTACTAATTAGTG
AGTTTAAAGATGATTTAACC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQKRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSG
LLSNLDAHSSFLNEKDFNDMKIQTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFDKNVVDVASKELKKYPNVKGVIL
DLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASENQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVI
VGENTFGKGSVQQIIPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHLESELEKID
KNKKEDKQENKDNKNLISQKQINDDAQLNSAIDTIKILNIKQGR

Sequences:

>Translated_444_residues
MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQKRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSG
LLSNLDAHSSFLNEKDFNDMKIQTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFDKNVVDVASKELKKYPNVKGVIL
DLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASENQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVI
VGENTFGKGSVQQIIPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHLESELEKID
KNKKEDKQENKDNKNLISQKQINDDAQLNSAIDTIKILNIKQGR
>Mature_444_residues
MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQKRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSG
LLSNLDAHSSFLNEKDFNDMKIQTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFDKNVVDVASKELKKYPNVKGVIL
DLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASENQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVI
VGENTFGKGSVQQIIPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHLESELEKID
KNKKEDKQENKDNKNLISQKQINDDAQLNSAIDTIKILNIKQGR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=334, Percent_Identity=30.8383233532934, Blast_Score=135, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48891; Mature: 48891

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQKRLEALDKLTKTLAIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
EQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKIQTNGEFGGLGITVGMKDG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCC
ALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDAVDKMRGKPKTQITLTIFRKG
CEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHCCCCCCEEEEEEEECC
ATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFDKNVVDVASKELKKYPNVKGVIL
CCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
DLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASENQEYKADPKNKISNASLVVLVNGG
EECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
SASASEIVSGALQDLKRGVIVGENTFGKGSVQQIIPINKTEALRLTIARYYLPSGRTIQA
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECCCCCCHHEEEEEEEECCCCCEEEE
VGVKPDIEVFPGKVNTQEDGFSIKESDLKQHLESELEKIDKNKKEDKQENKDNKNLISQK
ECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH
QINDDAQLNSAIDTIKILNIKQGR
HCCCHHHHHHHHCEEEEEEECCCC
>Mature Secondary Structure
MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQKRLEALDKLTKTLAIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
EQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKIQTNGEFGGLGITVGMKDG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCC
ALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDAVDKMRGKPKTQITLTIFRKG
CEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHCCCCCCEEEEEEEECC
ATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFDKNVVDVASKELKKYPNVKGVIL
CCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
DLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASENQEYKADPKNKISNASLVVLVNGG
EECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
SASASEIVSGALQDLKRGVIVGENTFGKGSVQQIIPINKTEALRLTIARYYLPSGRTIQA
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECCCCCCHHEEEEEEEECCCCCEEEE
VGVKPDIEVFPGKVNTQEDGFSIKESDLKQHLESELEKIDKNKKEDKQENKDNKNLISQK
ECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH
QINDDAQLNSAIDTIKILNIKQGR
HCCCHHHHHHHHCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]