| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is hemA [H]
Identifier: 57238258
GI number: 57238258
Start: 582370
End: 583668
Strand: Direct
Name: hemA [H]
Synonym: CJE0646
Alternate gene names: 57238258
Gene position: 582370-583668 (Clockwise)
Preceding gene: 57238259
Following gene: 57238257
Centisome position: 32.76
GC content: 30.79
Gene sequence:
>1299_bases ATGTATTATTGTATATCTTTTACTCATAAAAATACAGATATTGCCTTAAGGGAAAAGTTAAGCTTTTCCAATGAAGCTAA AAAAAGTGAGTTTTTAAAAATCATTAGCACTCATGAAAATATTGAAGAATGTTTGGTTATAAGCACTTGCAATCGTGTTG AAATTGTTGCTTTTGTAAAAATGGCCTGTGCGGAGTTTATTGTTAAATCTTTGGCTTTACTTTGTGATGTTGATAAAGAT ATTTTACTTGAAAAAGCTGATATTTTTGAAGATAGTGGAGCAATCCACCATCTTTTTTCTGTAGCAAGTTCTTTGGATAG TTTGGTGGTTGGAGAAACTCAGATAGCAGGACAATTAAAAGATGCCTTTGCTTTTGCTGTAAAAAATAATTTTTGTGGAG TACACCTTTCAAGAGCAGTACATAGTGCTTTTAAATGTGCTGCTAAGGTACGCAATGAAACTCAAATTTCTAAAAATTCT ATTTCTGTAGCTAGCGTTGCCGTGGCAAAAGCAAAAGAACTTGCAGATTTAACGCAAAAAAAAGCTGTTGTTATTGGAGC TGGAGAGATGGGAGAACTTGTGGCAAAACATTTAATTGCTGCGGGTGCTAAGGTGATTATTTTAAATCGTGATTTACAAA AAGCTAAAGATTTGTGTGAGAGACTTGGTGTTTTAAGCGAATATGATAGTTTAGAAAATTTAAAAAAATATTTAAATCAA TACGAGTTTTTTTTCTCAGCTACCAATGCACCAAATGCTATTATTACAAATTCTTTAATAGAAGAACTTTCTTATAAAAG GTATTTTTTTGATATTGCAGTTCCAAGGGATATTGATATCAATGAAAATGAAAATATATCTGTTTTTGCTGTAGATGATC TTGAAATTGTGGTTCAAAAAAATTTAGCACTAAGAGAACAAGAAGCTCGTATGGCTTATGGGATAATAGGTCGTGAAACA AGTGAATTTTTTAGGTATTTAAACGATTTGGCTTTGATGCCTATTATCAAAGCTATACGCTTGCAAGCTAAAGAATATGC AGATAAACAACTTGAAATTGCGTTAAAAAAAGGATATTTGAAAAAATCTGATAAAGAAGAGGCTAGAAAGTTGATTCATC AAGTTTTTAAGGCTTTTTTACACACGCCTACTGTAAATTTGAAACATTTACAAGGTAAAATGCAAAGCGATACAGTGATT AATGCTATGCGTTATGTTTTTGATTTGCAAAATAATCTTGAAGGTTTAAATCAATATAAATGTGAATTTGATATGGAGAA TAATGATGAGATTTACTAA
Upstream 100 bases:
>100_bases AAGCTAAAACTTATGCAAAAAAGGCTAGAAAAGCAATTGAAAAATATGATAATAACAAGCTTAATGATATTATTAAAGCT ATGATAGATAGGGAATTTTA
Downstream 100 bases:
>100_bases ATTTTATGCACCAAGTTTAAAAGAAGCGCCAAAAGATGCGAGTTTACCTAGTCATATTTTTTTAACGCGTGCGGGTTTTG TAGAACAAATTGGTAGCGGA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEECLVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKD ILLEKADIFEDSGAIHHLFSVASSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNS ISVASVAVAKAKELADLTQKKAVVIGAGEMGELVAKHLIAAGAKVIILNRDLQKAKDLCERLGVLSEYDSLENLKKYLNQ YEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPRDIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRET SEFFRYLNDLALMPIIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQGKMQSDTVI NAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY
Sequences:
>Translated_432_residues MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEECLVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKD ILLEKADIFEDSGAIHHLFSVASSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNS ISVASVAVAKAKELADLTQKKAVVIGAGEMGELVAKHLIAAGAKVIILNRDLQKAKDLCERLGVLSEYDSLENLKKYLNQ YEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPRDIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRET SEFFRYLNDLALMPIIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQGKMQSDTVI NAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY >Mature_432_residues MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEECLVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKD ILLEKADIFEDSGAIHHLFSVASSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNS ISVASVAVAKAKELADLTQKKAVVIGAGEMGELVAKHLIAAGAKVIILNRDLQKAKDLCERLGVLSEYDSLENLKKYLNQ YEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPRDIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRET SEFFRYLNDLALMPIIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQGKMQSDTVI NAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=399, Percent_Identity=31.8295739348371, Blast_Score=168, Evalue=6e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 48756; Mature: 48756
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEECLVISTCNRVEIVAFVK CEEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHH MACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVASSLDSLVVGETQIAGQLK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH DAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNSISVASVAVAKAKELADLTQK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KAVVIGAGEMGELVAKHLIAAGAKVIILNRDLQKAKDLCERLGVLSEYDSLENLKKYLNQ CEEEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPRDIDINENENISVFAVDDLEIVVQK HHHHEECCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHC NLALREQEARMAYGIIGRETSEFFRYLNDLALMPIIKAIRLQAKEYADKQLEIALKKGYL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC KKSDKEEARKLIHQVFKAFLHTPTVNLKHLQGKMQSDTVINAMRYVFDLQNNLEGLNQYK CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHEE CEFDMENNDEIY EEECCCCCCCCC >Mature Secondary Structure MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEECLVISTCNRVEIVAFVK CEEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHH MACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVASSLDSLVVGETQIAGQLK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH DAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNSISVASVAVAKAKELADLTQK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KAVVIGAGEMGELVAKHLIAAGAKVIILNRDLQKAKDLCERLGVLSEYDSLENLKKYLNQ CEEEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPRDIDINENENISVFAVDDLEIVVQK HHHHEECCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHC NLALREQEARMAYGIIGRETSEFFRYLNDLALMPIIKAIRLQAKEYADKQLEIALKKGYL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC KKSDKEEARKLIHQVFKAFLHTPTVNLKHLQGKMQSDTVINAMRYVFDLQNNLEGLNQYK CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHEE CEFDMENNDEIY EEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA