Click here to switch to the map view.

The map label for this gene is ahpF [C]

Identifier: 57238241

GI number: 57238241

Start: 599962

End: 600897

Strand: Direct

Name: ahpF [C]

Synonym: CJE0663

Alternate gene names: 57238241

Gene position: 599962-600897 (Clockwise)

Preceding gene: 57238244

Following gene: 57238239

Centisome position: 33.75

GC content: 32.16

Gene sequence:

>936_bases
ATGAAAAAAATAGATTTAATTGTAGTAGGTGCAGGTCCAACAGGGATAGGCTGTGCAGTTGAAGCCAAGCTTAAAAACAA
AGAAGTTTTGATACTAGAAAAATCAAATAACATTTGTCAAACTTTAATGCAATTTTATAAGGATGGCAAAAGAGTAGATA
AAGCTTATAAGGGATGCGAAGGAACCAATCACGGACATGTTCCTTTTGAAGATGGCACCAAAGAAAGCACTATAGAAACT
TTTCAAAACGCTTTAAAAGAGCACAATATAGAAGTTGAATTTGGTTCTGAAGTTGAGAGCGTTAAAAATGAAAATGGAGT
TTTTTTAGTAAGCACAGCTAAAGGTGTTTATGAGTGCAAAAACATTATTGTTGCTATAGGTAGAATGGGTAAGCCTAATA
AACCTGATTACAAACTTCCTATGACTTTAACAAAAATCATTAATTTTAATGCCAATTCAGTTTTAGCAAATGAAAAAATT
CTTGTTGTAGGTGGTGGAAATTCAGCAGTAGAATACGCTGTGGATTTGGCTAATTCAAATCAAGTTAGCCTTTGTTATCG
TAAAAAAGAATTTACAAGATTAAATGATATAAATCTTAAAGATATTCATGAAGCTGGAAATTCGGGTAAGGTAGAGTTAA
AACTAGGAATTGACATTAATGAAGTAGAAGATGATAATGGCAAGGCTAAGGTAAATTTTACCGATGGTACAAGCGATATT
TATGATAGAATCATTTATGCTATTGGTGGTTCTACTCCACTTGATTTTTTACAAAAATGTGGGATTAATGTTGATGATAA
AGGTGTGCCTTTAATGGATGAAAATAAACAAAGCAATGTTAAAGGCATCTTTGTAGCAGGAGATATTACTACTAAAAATG
GAGCAAGTATAGTTACAGGGTTAAATGACGCTGTGAAAATTCTTTCTGTGCTTTAA

Upstream 100 bases:

>100_bases
TTTCTTAATATTTTCAAGCAAATTTCGCATTTTTAATCCTTTATTTACAAAAAACTTGATAAATTATACAAAAAAATTTA
GAATTGAAAGGTAAATATAA

Downstream 100 bases:

>100_bases
AATTTAGCCTTTGGGCTAAATTTTTATTTTAGTTTAATCTAGAAAATTCATATGCAAAATAAAATAAATATTAATAAACT
TATTGCGAAATTACTTTATT

Product: pyridine nucleotide-disulphide oxidoreductase

Products: NA

Alternate protein names: FNR 1; Fd-NADP+ reductase 1 [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQFYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIET
FQNALKEHNIEVEFGSEVESVKNENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLANEKI
LVVGGGNSAVEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGIDINEVEDDNGKAKVNFTDGTSDI
YDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENKQSNVKGIFVAGDITTKNGASIVTGLNDAVKILSVL

Sequences:

>Translated_311_residues
MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQFYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIET
FQNALKEHNIEVEFGSEVESVKNENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLANEKI
LVVGGGNSAVEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGIDINEVEDDNGKAKVNFTDGTSDI
YDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENKQSNVKGIFVAGDITTKNGASIVTGLNDAVKILSVL
>Mature_311_residues
MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQFYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIET
FQNALKEHNIEVEFGSEVESVKNENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLANEKI
LVVGGGNSAVEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGIDINEVEDDNGKAKVNFTDGTSDI
YDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENKQSNVKGIFVAGDITTKNGASIVTGLNDAVKILSVL

Specific function: Serves To Protect The Cell Against DNA Damage By Alkyl Hydroperoxides. It Can Use Either NADH Or NADPH As Electron Donor For Direct Reduction Of Redox Dyes Or Of Alkyl Hydroperoxides When Combined With The Ahpc Protein. [C]

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 33750; Mature: 33750

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQFYKDGKRVDKAYKGCE
CCEEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCC
GTNHGHVPFEDGTKESTIETFQNALKEHNIEVEFGSEVESVKNENGVFLVSTAKGVYECK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCEEEEECCCHHHHHH
NIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLANEKILVVGGGNSAVEYAVDLANSN
HHHHEECCCCCCCCCCEECCEEEEEEEECCCCEEEECCEEEEEECCCCEEEEEEEECCCC
QVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGIDINEVEDDNGKAKVNFTDGTSDI
EEEEEEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCHHH
YDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENKQSNVKGIFVAGDITTKNGASIVTG
HHHHEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECEECCCCCEEEEC
LNDAVKILSVL
CHHHHHHHHCC
>Mature Secondary Structure
MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQFYKDGKRVDKAYKGCE
CCEEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCC
GTNHGHVPFEDGTKESTIETFQNALKEHNIEVEFGSEVESVKNENGVFLVSTAKGVYECK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCEEEEECCCHHHHHH
NIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLANEKILVVGGGNSAVEYAVDLANSN
HHHHEECCCCCCCCCCEECCEEEEEEEECCCCEEEECCEEEEEECCCCEEEEEEEECCCC
QVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGIDINEVEDDNGKAKVNFTDGTSDI
EEEEEEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCHHH
YDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENKQSNVKGIFVAGDITTKNGASIVTG
HHHHEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECEECCCCCEEEEC
LNDAVKILSVL
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA