Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

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The map label for this gene is 57237995

Identifier: 57237995

GI number: 57237995

Start: 1172031

End: 1172828

Strand: Direct

Name: 57237995

Synonym: CJE1256

Alternate gene names: NA

Gene position: 1172031-1172828 (Clockwise)

Preceding gene: 57237991

Following gene: 57238014

Centisome position: 65.92

GC content: 30.7

Gene sequence:

>798_bases
ATGCAAAAAGAATTTTTTCAAGAACTTCAAGATATTTTATATGAAAAAAATATAACTATAAAATTTCACTCTTTTCAAAA
TTTTTATGAAGACTTTAAAAGCCACAAATTTATTTTTAATCACGAGCATCAAAGCATTTTCAAAAAAAATACATCGCAAC
AAATTACCCTACTTCATCCTACGCGCATAAGAAGGCCTAAATTTGTCAATTCAACTCATGCGCTTGCTAAAATAATTCAT
TCAGTCGCTCATATAGAATTTAATGCAATTAACCTAGCTTTAGATGCGAGTTATCGCTTTAAAAATCTACCTTTGCAATT
TTATTACGATTGGCTGGAGGTAGCAGATGAGGAAATTAAACATTTCAAACTTTTAAATTCAGCACTTAAAGAACTTGGTT
ACAAATATGGAAATTTTCCAGTGCATGATAATTTAGAATCTGCTCTAGAAGCTACAAAAGACTCTTTAAGCTTTAGAATG
GGAGTAGTTCATAGAGGTTTAGAAGCTAAAGGGCTTGATGCCAACCCCTTTGTTGTTCAAAAACTTCAAAGTTCCAATCA
TTCCATTAAAAATCTTCTAATGGAATATCTTGAAATTATACTTAATGATGAAATAAAACACGTTAAAAAAGGAGATACTT
GGTGGGAATTTGCAAATCAAAACAGGTATGATTTTATTGAGCTTTGCAAAACGTTTAAACAATTCTCTCTTGCGGGAAAA
AAACTTAACATTCAAGCAAGAATCAAAGCTGGCTTCACTCAAGAAGAATGCGAAGTCATTGAAAAATTTTACTCTTGA

Upstream 100 bases:

>100_bases
AATTCTTTCATGATCTACCCTTGTAAAATAATTTTTATATTATATAATTAAAATTTCAATTTTAAATGATAAATTTTTAC
AATTTTCAAGAAAGTTTTAA

Downstream 100 bases:

>100_bases
TTTCTTATCTTAAATTTTGAAACGATAATGGTATATAAAACCCGAATAATGCCATAAAGCACATACAAGCTTGCTAAAAT
TACTAAACTTTCAAGAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MQKEFFQELQDILYEKNITIKFHSFQNFYEDFKSHKFIFNHEHQSIFKKNTSQQITLLHPTRIRRPKFVNSTHALAKIIH
SVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFKLLNSALKELGYKYGNFPVHDNLESALEATKDSLSFRM
GVVHRGLEAKGLDANPFVVQKLQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWEFANQNRYDFIELCKTFKQFSLAGK
KLNIQARIKAGFTQEECEVIEKFYS

Sequences:

>Translated_265_residues
MQKEFFQELQDILYEKNITIKFHSFQNFYEDFKSHKFIFNHEHQSIFKKNTSQQITLLHPTRIRRPKFVNSTHALAKIIH
SVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFKLLNSALKELGYKYGNFPVHDNLESALEATKDSLSFRM
GVVHRGLEAKGLDANPFVVQKLQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWEFANQNRYDFIELCKTFKQFSLAGK
KLNIQARIKAGFTQEECEVIEKFYS
>Mature_265_residues
MQKEFFQELQDILYEKNITIKFHSFQNFYEDFKSHKFIFNHEHQSIFKKNTSQQITLLHPTRIRRPKFVNSTHALAKIIH
SVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFKLLNSALKELGYKYGNFPVHDNLESALEATKDSLSFRM
GVVHRGLEAKGLDANPFVVQKLQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWEFANQNRYDFIELCKTFKQFSLAGK
KLNIQARIKAGFTQEECEVIEKFYS

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 31333; Mature: 31333

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEFFQELQDILYEKNITIKFHSFQNFYEDFKSHKFIFNHEHQSIFKKNTSQQITLLHP
CCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCEEEEECC
TRIRRPKFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIK
HHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHH
HFKLLNSALKELGYKYGNFPVHDNLESALEATKDSLSFRMGVVHRGLEAKGLDANPFVVQ
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
KLQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWEFANQNRYDFIELCKTFKQFSLAGK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCC
KLNIQARIKAGFTQEECEVIEKFYS
EEEEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQKEFFQELQDILYEKNITIKFHSFQNFYEDFKSHKFIFNHEHQSIFKKNTSQQITLLHP
CCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCEEEEECC
TRIRRPKFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIK
HHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHH
HFKLLNSALKELGYKYGNFPVHDNLESALEATKDSLSFRMGVVHRGLEAKGLDANPFVVQ
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
KLQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWEFANQNRYDFIELCKTFKQFSLAGK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCC
KLNIQARIKAGFTQEECEVIEKFYS
EEEEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]