| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is aat [H]
Identifier: 57237991
GI number: 57237991
Start: 1168902
End: 1169549
Strand: Direct
Name: aat [H]
Synonym: CJE1252
Alternate gene names: 57237991
Gene position: 1168902-1169549 (Clockwise)
Preceding gene: 57237990
Following gene: 57237995
Centisome position: 65.75
GC content: 26.54
Gene sequence:
>648_bases ATGGAAAGCTCGAATTTATATTCTAAATTACTCAATGCACCTAAAAATGCTCCTGTATTTTTAAGTCAAAATTTAGAAGC TGATTTTATTGTAAAAGCTTATACTTTTGGTCTATTCCCATGGACAAGTAAACCTGTAACTTGGTGGTGTCCAGATCCTA GATGCATTTTAATTCCAAATCAAATTCACATCCAAAAAAATATGAAAAAATTTATTAATCTCTATCAAATTAAACTTGAT TATGATTTTTTAAAATTAATTACATTATGTCGCGATACACGCTCTCAAAGCTGGATAAATGATGAATTTATTACCACTTA TTATAAGTTATTTACCCAAGGCTATGCGCATAGCCTTGAACTTTATGAAAATAATGAACTTATAGGTGGAATTTATGGTT TAATTTTAGGCAAGGTTTTCTTTGGTGAAAGTATGGTAAGCATTAAAAAAAATGCATCTAAAGTTGCCATGATTAAACTT TGTGATTTATTAAAACCTTATGATTTTATCATAGATTGTCAAGTTTATAACCAACATTTAGAATTTATGGGTGCTCATAA TATTTCTAGGAAAGAATTTTTAAATATTTTAAAAGAAAAATGCAATCAAGAAAGTGGTTTTAAAAATTTTAAAGATTTAA TTACTTAA
Upstream 100 bases:
>100_bases AAACGCATAATTTCTGAGGAAATAGGAGAAAAAATCAGTGATGAAATTTTATTCGGAAAGCTTAAAAAAGGCGGTATAGC TAAAATCAAACTTGGTAAAA
Downstream 100 bases:
>100_bases AAATAAGCGTGAAAATCACGCTTATGACATCGCTTTAGCAACTTCAGCAGAGCTTTCACGAATTTTCTCCATACACTCTC TTGCTTCTTTTGCAAGTTCA
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSKPVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLD YDFLKLITLCRDTRSQSWINDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT
Sequences:
>Translated_215_residues MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSKPVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLD YDFLKLITLCRDTRSQSWINDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT >Mature_215_residues MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSKPVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLD YDFLKLITLCRDTRSQSWINDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=190, Percent_Identity=37.8947368421053, Blast_Score=150, Evalue=9e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 25143; Mature: 25143
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSKPVTWWCPDPRCILIPN CCCHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHEECCCCCCCEEEECCCCEEEEECC QIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWINDEFITTYYKLFTQGYAHSLE HHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEE LYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKLCDLLKPYDFIIDCQVYNQHL EECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHH EFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSKPVTWWCPDPRCILIPN CCCHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHEECCCCCCCEEEECCCCEEEEECC QIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWINDEFITTYYKLFTQGYAHSLE HHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEE LYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKLCDLLKPYDFIIDCQVYNQHL EECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHH EFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA