| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237988
Identifier: 57237988
GI number: 57237988
Start: 1165909
End: 1166511
Strand: Direct
Name: 57237988
Synonym: CJE1249
Alternate gene names: NA
Gene position: 1165909-1166511 (Clockwise)
Preceding gene: 57237987
Following gene: 57237989
Centisome position: 65.58
GC content: 28.36
Gene sequence:
>603_bases ATGAAAAAAATTTCAGCCCTATTTTTAATAAGTTTAGCATTTTTTCTTAATGCTTGCTCCAAGGAAGAAGAAATTCAAAA TGATTTTATGTTTGAAGAGTATCACAAAGGAGATAAAATAGTCTTAAATAGTGTAAATGGTGGAAGCAAAACTTTAATAA GAACAGATAAAGGTTTTGTGGTGGAAGGAGAGGAAGGAAAAGTTCTAATGTTTGATTTTTTTGGCACTTTTTGCACCCCA TGTAAAGAAGAAGCTTTAGATCTTAGCAAACTTTGGAAAAATAATTCTAGCAAATTTATCATTATAGGACTTACACATTT TGAAGATGTTAGCGATGAAACAGTTAAAAAATTCGCGGATGATTATGGTGCTTACTATTTTCTAAGCAATGACAGCTCTA ATGATCGTATTATTGCTCAAATTTTAAAAGATATAGACTATCAAAATATGGAGCAACTTCCTTTTAAAGTTGTTTTAAAA AATGGAATTTATCAAAAAATAAGCGATTACTGGAATAATAATACTCCAACAAATTTTTATCTTGGTAAAATTCCAACAGA ACTCATGCAAGAAGATTTAAATAAAATCTACAAAGGAAAATAA
Upstream 100 bases:
>100_bases AAAGGGAAAAATTTGCACGACAAGCGTGAAACTTTAAAGAAAAAGCAAGCCGATTTAGAAGCTAAAGCTGCTATGAAAAA TTACAAATAAAGGAAAATAA
Downstream 100 bases:
>100_bases TGCCAAAAACCCAAACTCTAGAGCAAACAAAACTTAGTGAACCAAAAATGTATAAAGTTATACTCTTAAATGATGATGTA ACAACCATGGATTTTGTTAT
Product: thioredoxin
Products: NA
Alternate protein names: Redoxin Domain-Containing Protein; Thiredoxin; Periplasmic Thioredoxin; Lipoprotein Thiredoxin
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNSVNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTP CKEEALDLSKLWKNNSSKFIIIGLTHFEDVSDETVKKFADDYGAYYFLSNDSSNDRIIAQILKDIDYQNMEQLPFKVVLK NGIYQKISDYWNNNTPTNFYLGKIPTELMQEDLNKIYKGK
Sequences:
>Translated_200_residues MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNSVNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTP CKEEALDLSKLWKNNSSKFIIIGLTHFEDVSDETVKKFADDYGAYYFLSNDSSNDRIIAQILKDIDYQNMEQLPFKVVLK NGIYQKISDYWNNNTPTNFYLGKIPTELMQEDLNKIYKGK >Mature_200_residues MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNSVNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTP CKEEALDLSKLWKNNSSKFIIIGLTHFEDVSDETVKKFADDYGAYYFLSNDSSNDRIIAQILKDIDYQNMEQLPFKVVLK NGIYQKISDYWNNNTPTNFYLGKIPTELMQEDLNKIYKGK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23082; Mature: 23082
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNSVNGGSKTLIRTDKGFV CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCEE VEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIIIGLTHFEDVSDETVKKFAD EECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH DYGAYYFLSNDSSNDRIIAQILKDIDYQNMEQLPFKVVLKNGIYQKISDYWNNNTPTNFY HCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHCHHHHHHHHHCCCCCCEEE LGKIPTELMQEDLNKIYKGK ECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNSVNGGSKTLIRTDKGFV CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCEE VEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIIIGLTHFEDVSDETVKKFAD EECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH DYGAYYFLSNDSSNDRIIAQILKDIDYQNMEQLPFKVVLKNGIYQKISDYWNNNTPTNFY HCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHCHHHHHHHHHCCCCCCEEE LGKIPTELMQEDLNKIYKGK ECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA