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The map label for this gene is clpS [H]

Identifier: 57237989

GI number: 57237989

Start: 1166511

End: 1166801

Strand: Direct

Name: clpS [H]

Synonym: CJE1250

Alternate gene names: 57237989

Gene position: 1166511-1166801 (Clockwise)

Preceding gene: 57237988

Following gene: 57237990

Centisome position: 65.61

GC content: 31.96

Gene sequence:

>291_bases
ATGCCAAAAACCCAAACTCTAGAGCAAACAAAACTTAGTGAACCAAAAATGTATAAAGTTATACTCTTAAATGATGATGT
AACAACCATGGATTTTGTTATAGAAATTTTGATGAATATTTTTCATCAAAACCTTGAGAAAGCAAGTCAAACAATGTTAG
AAATTCATCACAATGGTTCTGGAATTTGTGGCATTTACACCCAGGAAATAGCTCTTTCAAAACAAAAAAAAGTTATGGAT
GCGGCTAAACTTGCTAATTTTCCACTACAAGCAAAGGTGGAAGAAGAATGA

Upstream 100 bases:

>100_bases
GCGATTACTGGAATAATAATACTCCAACAAATTTTTATCTTGGTAAAATTCCAACAGAACTCATGCAAGAAGATTTAAAT
AAAATCTACAAAGGAAAATA

Downstream 100 bases:

>100_bases
AATACCAAGAAAATTTACAAAAATATCTTGATAATGCCAAAAATCTAAGCTTAATAAATCACCATGAATTTGTTACCTGT
GAGCATGTACTGTTTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVMD
AAKLANFPLQAKVEEE

Sequences:

>Translated_96_residues
MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVMD
AAKLANFPLQAKVEEE
>Mature_95_residues
PKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVMDA
AKLANFPLQAKVEEE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=84, Percent_Identity=44.047619047619, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 10937; Mature: 10806

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGS
CCCCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GICGIYTQEIALSKQKKVMDAAKLANFPLQAKVEEE
CEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure 
PKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGS
CCCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GICGIYTQEIALSKQKKVMDAAKLANFPLQAKVEEE
CEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA