| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is livJ [C]
Identifier: 57237905
GI number: 57237905
Start: 1079019
End: 1080128
Strand: Reverse
Name: livJ [C]
Synonym: CJE1162
Alternate gene names: 57237905
Gene position: 1080128-1079019 (Counterclockwise)
Preceding gene: 57237906
Following gene: 57237904
Centisome position: 60.76
GC content: 32.07
Gene sequence:
>1110_bases ATGAAAAAAAGTTTAATTTTAGCAAGTATTCTAAGTTTAAGTTTAAGTGCTGCGGAAGTCAAAATAGGAGTTGTTTTACC GCTTAGCGGAGCTACTGCAGCATATGGACAAAGTGCACTAGAAGGGATTAAACTTGCAAATTCAATGCAATCAACTTTAA GTAATGGAGATAAGGTTTCTCTTGCTATTATTGATACTAAAGGTGATAAATTAGAATCTTCGAGTGGAGCAAATCGTTTA GTTTCTCAAGATAAAGTTATAGGTCTTATAGGGGAAATGGTTACTGCTAATACATTGCAAGTTATGCGCGTAGCAGAAGA TAATAAAATTCCATTGATCGCTCCTGCTGCAACTGGTGATAGATTGCTTGATAAAAAAATATATTCTTCTCGAGTATGTT TTATGGACAGTTTTCAAGGTTCATCTTTAGCAAAATATGTTTTTTCAAAACTTAATTACAAAAGTGCTGTTATTGTAGTA GATCAAAGCACTGACTATTCCTTAGGTTTAGCAAAAGCTTTTGAAAAACAGTACAAGTCTAATGGTGGTCAAATTCTTAG AATTTTAAGAGTTAATTCAGGTGATAAAGATTTTAGAGCTATTGTAGCTCAAGTTAAAAGTTTAAATCCAGAATTTATTT TTTTACCGCTTTATTATAGCGAAGCTTCTTTATTTGCAAGACAATCAAAACTCGCAGGTTTAAATATTCCTATGGGTTCT GCAGATGGAGTTGCTGATCAAACTTTTATTAGTTTAGCTGGAGATGCAAGCGAGGGGTATATTTTCACAGATAGTTTTGA TGCTAATAATCCAACTACAAAATTAAGCAAAGAATTTATCAGTGTTTATGAAAAAGCTAAAGGAACAAAAGAAGTTCCAA ATTTTTCGGCTATGGGTGCTGATGCGTATTTTGTAATGCTAAATGCTATGAATGCTTGCGTTGAAAATCTTACTAGTAAG TGTGTCAATGAAAAAATTCACCAAACTAAAAATTATCAAGGTGTTTCTGGTGTTATCAGTATTGATCAAACAGGAAATGC AACTCGTTCTGTAGTGGTTAAAGAAATTAAAAATCAGAAGCAAAATTATAAAGATATTATCAATCCTTAA
Upstream 100 bases:
>100_bases CGGTAATGCTATTCGTTCTGTTGTGATTAAAGAAATTCAAAATCAAAAACAAAATTATAAAACAATTATAAATCCATAAT TACTAAAATAAAGGTAGAGA
Downstream 100 bases:
>100_bases AGGAAAAATAGAAAGATTATGGATTCTACTTTATTTTTACAACAACTTGTTAATGGACTTAGTTTAGGCAGTATGTATGC CCTTATTGCTGTTGGCTATA
Product: high affinity branched-chain amino acid ABC transporter periplasmic amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIKLANSMQSTLSNGDKVSLAIIDTKGDKLESSSGANRL VSQDKVIGLIGEMVTANTLQVMRVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLYYSEASLFARQSKLAGLNIPMGS ADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLSKEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSK CVNEKIHQTKNYQGVSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP
Sequences:
>Translated_369_residues MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIKLANSMQSTLSNGDKVSLAIIDTKGDKLESSSGANRL VSQDKVIGLIGEMVTANTLQVMRVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLYYSEASLFARQSKLAGLNIPMGS ADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLSKEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSK CVNEKIHQTKNYQGVSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP >Mature_369_residues MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIKLANSMQSTLSNGDKVSLAIIDTKGDKLESSSGANRL VSQDKVIGLIGEMVTANTLQVMRVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLYYSEASLFARQSKLAGLNIPMGS ADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLSKEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSK CVNEKIHQTKNYQGVSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=283, Percent_Identity=28.9752650176678, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1789867, Length=267, Percent_Identity=28.4644194756554, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39746; Mature: 39746
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIKLANSMQSTLSNGDKVS CCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE LAIIDTKGDKLESSSGANRLVSQDKVIGLIGEMVTANTLQVMRVAEDNKIPLIAPAATGD EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCC RLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVVDQSTDYSLGLAKAFEKQYKS HHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHC NGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLYYSEASLFARQSKLAGLNIPMGS CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCC ADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLSKEFISVYEKAKGTKEVPNFSAMGA CCCCCCHHEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQGVSGVISIDQTGNATRSVVVKEIKNQK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH QNYKDIINP HHHHHCCCC >Mature Secondary Structure MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIKLANSMQSTLSNGDKVS CCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE LAIIDTKGDKLESSSGANRLVSQDKVIGLIGEMVTANTLQVMRVAEDNKIPLIAPAATGD EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCC RLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVVDQSTDYSLGLAKAFEKQYKS HHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHC NGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLYYSEASLFARQSKLAGLNIPMGS CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCC ADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLSKEFISVYEKAKGTKEVPNFSAMGA CCCCCCHHEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQGVSGVISIDQTGNATRSVVVKEIKNQK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH QNYKDIINP HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]