| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is livH [H]
Identifier: 57237904
GI number: 57237904
Start: 1078104
End: 1079000
Strand: Reverse
Name: livH [H]
Synonym: CJE1161
Alternate gene names: 57237904
Gene position: 1079000-1078104 (Counterclockwise)
Preceding gene: 57237905
Following gene: 57237903
Centisome position: 60.69
GC content: 33.78
Gene sequence:
>897_bases ATGGATTCTACTTTATTTTTACAACAACTTGTTAATGGACTTAGTTTAGGCAGTATGTATGCCCTTATTGCTGTTGGCTA TACTATGGTTTATGGCGTGTTAAGACTTATTAATTTTGCTCACGGCGATATTATGATGGTTGGTGCTTATGCGGCTCTTT TTTGCATGACTAATCTAAATGTTCCTTTTCTAGGAGCTTTGTCTTTAGCAATGATTTTTGCTGCTTGTGTTGGAATAGCT ACAGATAGAATCGCTTATAAACCTTTAAGACAGGCTCCTAGAATTTCATTGTTGATTACAGCAATCGGTATTAGTTTTTT CTTGCAAAATCTTTTTAATATGCTTTTTACTTCAACACCTAGAACTTTTACACCGCCAAGTTATTTTGAGGAAAGTGTTA ATTTTGGTGGAGTGATAACAACTTATGGTTCTTTAATGGTTCCTGCTCTTACATTTGTTATTTTAATAGCAGTGTTATGG ATTTTGTATAAAAGCAAATATGGTATAGCTATTCGTGCTTTGGCATTTGATATACAAACAGTAAATTTAATGGGTATAGA TGCAAATCGTATTATTGCTATAGTTTTTGCCCTAGGTTCAGCTTTGGCAGCAGTTGGGGGTGTTTTTTGGGCTGCAAATT ATTACTCTGTTGAACCTACTATGGGAACTTTAATAGGTTTAAAAGCTTTTGCTGCTGCAGTTTTAGGAGGTATAGGTTCT GTAGTAGGTGCAGTTTTGGGTGGACTTATTATAGGATTTACTGAAGTTGTTGTTGTGGCTTTTTTTCCAGATTTATCAGG CTTTAAAGATGCATTTGCTTTTATTTTTTTGGTGTTTATATTGTTATTTAGGCCTACGGGAATTTTAGGTATAAATTTTG AAAAGAGTAGGTTTTAA
Upstream 100 bases:
>100_bases AACAGGAAATGCAACTCGTTCTGTAGTGGTTAAAGAAATTAAAAATCAGAAGCAAAATTATAAAGATATTATCAATCCTT AAAGGAAAAATAGAAAGATT
Downstream 100 bases:
>100_bases TGATGGTTAGAATTAAGGTTTCACATTTAATCTTTTTAATTGCTTCAATTATTTTTATTTTCATTTCTCCTTATATTTTT GGGGACTATGGATTAAACAT
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIA TDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLIGLKAFAAAVLGGIGS VVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIFLVFILLFRPTGILGINFEKSRF
Sequences:
>Translated_298_residues MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIA TDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLIGLKAFAAAVLGGIGS VVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIFLVFILLFRPTGILGINFEKSRF >Mature_298_residues MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIA TDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLIGLKAFAAAVLGGIGS VVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIFLVFILLFRPTGILGINFEKSRF
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=299, Percent_Identity=41.4715719063545, Blast_Score=194, Evalue=7e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32000; Mature: 32000
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILYKSKYGIAIRALAFDIQT CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHEE VNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLIGLKAFAAAVLGGIGS EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH VVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIFLVFILLFRPTGILGINFEKSRF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCC >Mature Secondary Structure MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILYKSKYGIAIRALAFDIQT CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHEE VNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLIGLKAFAAAVLGGIGS EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH VVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIFLVFILLFRPTGILGINFEKSRF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]