| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237860
Identifier: 57237860
GI number: 57237860
Start: 1037234
End: 1038736
Strand: Reverse
Name: 57237860
Synonym: CJE1115
Alternate gene names: NA
Gene position: 1038736-1037234 (Counterclockwise)
Preceding gene: 57237861
Following gene: 57237859
Centisome position: 58.43
GC content: 26.41
Gene sequence:
>1503_bases TTGCAAGAAAAAATCAATGAATTAAAAGATTATGCAGAACTTGCACAAGCTAGTTATTTTTATTTTGATTTAGAAGATTG TATATTGCAAGAAAATGAAACTATTATTACCTTAAATGAGCTTTTAAACTTAAGCTATAATGGCAAAATAGCTGGAAAAA AAGAAAAGGTCGGACAAAAATATAGTTTTATTAGTAAGGGTGAACTCAACGGAGAATTTGGAGAATTACAGACTAAAAAT TTCATTCAAAGATATGAGGTTCAATTTCATCAGCCTAACACTACAAGTGGCTTTAGTGCTACTTTGTTTTACGATAAACA AAAAGATGAATTTATAGTAGGGTTTAGAGGAACTGAGGGTTTTTGGAATATAGATACGATGCAAGACATAACTCTATCCC TCAATGGCAATATCCAATCTTCTTCTCTTTTAGAATTTTTAGAACAAGTAAATAAAATAATCAAAAACAAACACAAAAGA ATTATATTTGTAGGACATTCATTGGGTGGGTATTTAGCTCAAATGGCTTTGATATATTGCGATATTAAATATAAAGACAA ATTATCTTTTAGCCCTAATGAAGTTTATACTTTTAATGCCCCTAGTGTTTATGGTTGGAATTTTCCTAATATAGCTATCA ACCCTAATACTATAAAAATTATGCAAGATCTTTTAGGAAAATACACTATAGATGTTTCAGAAAAAATCACTCATATTTAT GATAATGGTAAAATTGAAATCATTGCTTCAGCTCAATATGGTGCAAGCAATGCTTTAGGTATATATACAGGGAAAAATGA TCACTCTATAAAACCTCTTGTTAATACTCTCTATTTTTATTCCTATCTTTTAGAATTAGATGCTAACTATAACAAAGTCA AAGATAAAAGCCTTAGTGAGTGTATAGAGTATCTTAATCATTTTATGAAAAATATTCAAATTTATACAGAAACTTTTGTG TTAAAAAATAATGCTATTAATAATAAAAATTTCGCTCTTAAAAATAGACCTCTTGGACTTTTTAGAAGTTCTCCAGAAAA AATCAATCATTTTGAATATTTTCTTTCATTAATAGCCACCATAATGCAAGAAACAAATGGTATTTTAGAAGAGCTTGGAG ATAATTATTATGCAAGCTATAAAGCTCCTACCATTAGTCAAACAAAAATCATAGATTTTATTTTAAAGGCGCAAAAAAAA GAAAAATACATTTTAATTCTTGATAAAAATGATTTTAATAAATACAGAAAAGATTGTTCCTTTATTAATAATCAAGAAAA TTTAGCTCATAAAATTGCCATTGGGGAATTTAGAATTTTCATTGTGGTTTATAAAGATATGAAATGTCTTGAAAATATTA ATAATATAACAAAAATATATGGATATAATTCAAAAAGTTATAAAATAAAAGATCAAATTTGGGATGAGCAATATTTAGGT GGAGTTTGTAAAATATCACAAGCTTTGTATTTTAATGGAAAAGCTAAAATAGGTATTATTTAG
Upstream 100 bases:
>100_bases TTATCCTATAGCTTCGATATTATATTACATGTTTTATTATCATAATAGTTTTTATGTTACATTATATATTTTTTTGTCAT TATTTAAATAAAGGATAATT
Downstream 100 bases:
>100_bases GAAAATTATGATAGGTAAAGACTTTTTATATTCTATTCATAAAGATAAAAAAAGTATTTATTTGTTTTGTGAAAATAAAA GCATAATTGATTGTCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MQEKINELKDYAELAQASYFYFDLEDCILQENETIITLNELLNLSYNGKIAGKKEKVGQKYSFISKGELNGEFGELQTKN FIQRYEVQFHQPNTTSGFSATLFYDKQKDEFIVGFRGTEGFWNIDTMQDITLSLNGNIQSSSLLEFLEQVNKIIKNKHKR IIFVGHSLGGYLAQMALIYCDIKYKDKLSFSPNEVYTFNAPSVYGWNFPNIAINPNTIKIMQDLLGKYTIDVSEKITHIY DNGKIEIIASAQYGASNALGIYTGKNDHSIKPLVNTLYFYSYLLELDANYNKVKDKSLSECIEYLNHFMKNIQIYTETFV LKNNAINNKNFALKNRPLGLFRSSPEKINHFEYFLSLIATIMQETNGILEELGDNYYASYKAPTISQTKIIDFILKAQKK EKYILILDKNDFNKYRKDCSFINNQENLAHKIAIGEFRIFIVVYKDMKCLENINNITKIYGYNSKSYKIKDQIWDEQYLG GVCKISQALYFNGKAKIGII
Sequences:
>Translated_500_residues MQEKINELKDYAELAQASYFYFDLEDCILQENETIITLNELLNLSYNGKIAGKKEKVGQKYSFISKGELNGEFGELQTKN FIQRYEVQFHQPNTTSGFSATLFYDKQKDEFIVGFRGTEGFWNIDTMQDITLSLNGNIQSSSLLEFLEQVNKIIKNKHKR IIFVGHSLGGYLAQMALIYCDIKYKDKLSFSPNEVYTFNAPSVYGWNFPNIAINPNTIKIMQDLLGKYTIDVSEKITHIY DNGKIEIIASAQYGASNALGIYTGKNDHSIKPLVNTLYFYSYLLELDANYNKVKDKSLSECIEYLNHFMKNIQIYTETFV LKNNAINNKNFALKNRPLGLFRSSPEKINHFEYFLSLIATIMQETNGILEELGDNYYASYKAPTISQTKIIDFILKAQKK EKYILILDKNDFNKYRKDCSFINNQENLAHKIAIGEFRIFIVVYKDMKCLENINNITKIYGYNSKSYKIKDQIWDEQYLG GVCKISQALYFNGKAKIGII >Mature_500_residues MQEKINELKDYAELAQASYFYFDLEDCILQENETIITLNELLNLSYNGKIAGKKEKVGQKYSFISKGELNGEFGELQTKN FIQRYEVQFHQPNTTSGFSATLFYDKQKDEFIVGFRGTEGFWNIDTMQDITLSLNGNIQSSSLLEFLEQVNKIIKNKHKR IIFVGHSLGGYLAQMALIYCDIKYKDKLSFSPNEVYTFNAPSVYGWNFPNIAINPNTIKIMQDLLGKYTIDVSEKITHIY DNGKIEIIASAQYGASNALGIYTGKNDHSIKPLVNTLYFYSYLLELDANYNKVKDKSLSECIEYLNHFMKNIQIYTETFV LKNNAINNKNFALKNRPLGLFRSSPEKINHFEYFLSLIATIMQETNGILEELGDNYYASYKAPTISQTKIIDFILKAQKK EKYILILDKNDFNKYRKDCSFINNQENLAHKIAIGEFRIFIVVYKDMKCLENINNITKIYGYNSKSYKIKDQIWDEQYLG GVCKISQALYFNGKAKIGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57763; Mature: 57763
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKINELKDYAELAQASYFYFDLEDCILQENETIITLNELLNLSYNGKIAGKKEKVGQK CCHHHHHHHHHHHHHHCEEEEEEHHHHHHCCCCEEEEEHHHHCCCCCCEECCCHHHCCCH YSFISKGELNGEFGELQTKNFIQRYEVQFHQPNTTSGFSATLFYDKQKDEFIVGFRGTEG HCEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCC FWNIDTMQDITLSLNGNIQSSSLLEFLEQVNKIIKNKHKRIIFVGHSLGGYLAQMALIYC EEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHEE DIKYKDKLSFSPNEVYTFNAPSVYGWNFPNIAINPNTIKIMQDLLGKYTIDVSEKITHIY EEEECCCCCCCCCEEEEECCCEEECCCCCCEEECCCHHHHHHHHHCCEEEEHHHHHHEEE DNGKIEIIASAQYGASNALGIYTGKNDHSIKPLVNTLYFYSYLLELDANYNKVKDKSLSE CCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH CIEYLNHFMKNIQIYTETFVLKNNAINNKNFALKNRPLGLFRSSPEKINHFEYFLSLIAT HHHHHHHHHHCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH IMQETNGILEELGDNYYASYKAPTISQTKIIDFILKAQKKEKYILILDKNDFNKYRKDCS HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH FINNQENLAHKIAIGEFRIFIVVYKDMKCLENINNITKIYGYNSKSYKIKDQIWDEQYLG HCCCCHHHHHEEEECCEEEEEEEECCHHHHHHHHHHEEEEECCCCCEEEHHHHCCHHHCC GVCKISQALYFNGKAKIGII CHHHCCCEEEECCCEEEECC >Mature Secondary Structure MQEKINELKDYAELAQASYFYFDLEDCILQENETIITLNELLNLSYNGKIAGKKEKVGQK CCHHHHHHHHHHHHHHCEEEEEEHHHHHHCCCCEEEEEHHHHCCCCCCEECCCHHHCCCH YSFISKGELNGEFGELQTKNFIQRYEVQFHQPNTTSGFSATLFYDKQKDEFIVGFRGTEG HCEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCC FWNIDTMQDITLSLNGNIQSSSLLEFLEQVNKIIKNKHKRIIFVGHSLGGYLAQMALIYC EEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHEE DIKYKDKLSFSPNEVYTFNAPSVYGWNFPNIAINPNTIKIMQDLLGKYTIDVSEKITHIY EEEECCCCCCCCCEEEEECCCEEECCCCCCEEECCCHHHHHHHHHCCEEEEHHHHHHEEE DNGKIEIIASAQYGASNALGIYTGKNDHSIKPLVNTLYFYSYLLELDANYNKVKDKSLSE CCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH CIEYLNHFMKNIQIYTETFVLKNNAINNKNFALKNRPLGLFRSSPEKINHFEYFLSLIAT HHHHHHHHHHCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH IMQETNGILEELGDNYYASYKAPTISQTKIIDFILKAQKKEKYILILDKNDFNKYRKDCS HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH FINNQENLAHKIAIGEFRIFIVVYKDMKCLENINNITKIYGYNSKSYKIKDQIWDEQYLG HCCCCHHHHHEEEECCEEEEEEEECCHHHHHHHHHHEEEEECCCCCEEEHHHHCCHHHCC GVCKISQALYFNGKAKIGII CHHHCCCEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA