| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237859
Identifier: 57237859
GI number: 57237859
Start: 1035796
End: 1037226
Strand: Reverse
Name: 57237859
Synonym: CJE1114
Alternate gene names: NA
Gene position: 1037226-1035796 (Counterclockwise)
Preceding gene: 57237860
Following gene: 57237858
Centisome position: 58.34
GC content: 26.14
Gene sequence:
>1431_bases ATGATAGGTAAAGACTTTTTATATTCTATTCATAAAGATAAAAAAAGTATTTATTTGTTTTGTGAAAATAAAAGCATAAT TGATTGTCAAAGTATTTATGATGAACTTTATAAATTAGAAGCAACGACAGATTTTACTTTTGAAGAACTCCAAAACTATC AAGCTTATATCTTCCTAAACTCCACTCTCCTTACAGGCTCAAATGAACTTCCTAACAATCCTTTTTACTTTGGAGAATTA GATCAAGATAATACTATAAAACAAGATACACCTAGTTATTATTTTTCTCCTAAAGATGAAAGCAGTGGTTTAGGAAGACT TAGTATCTTTTATAAAAATGATGAACTTTGTTTGCTTAATTATTCTATATTAGAAAATTCTTTAAATATCAAATTAGAAT GTTTAAGCAAACAAAGCTTAGAGTATAAAGACTTAATTTCAAACACTTTAAAAGAACAAAAAACCACACAAGTAGATAAA AAACAAGCTATAGCTAAACTTCATGCTCTTTTAGAAAATCAAAACCTAGAATGTATCCATGGAGGTAAAGTCATACTTAA ATCAAACAAAGGAAAAACTTTTAAAGATGATGGCGTGCCTATAATGCTAGAAAGTGATTTATTAAACTCTAGTATAGTAG CTTGTCCTAATACTATAGCAGGTGTAAGTGTTCCTTGTACTAAAGTTGTTAATGTAAAAGGATCCTTATCTCAAAAGAAA GTCAATAATGAATATGTAATCTTACAAGAACTCATCTCAGCTTGTAAAACAGATAAAGGCTTTGCTTTAAAAGTAAGCTT TACTCCTACTAAGTTTAAATTTGATCACAGCTTTGATCCTAAAGAGGGCTTAGGAGAACAAAGTAAAAATCAAATAGAGT TAAAAGAGCCTATAATAAGACTTCATTATAAAAGTGATAGATTTCAAAAAGATAATTTACCTATCTATAATCTTTTAATC AATAATGAAAAAAAAGAACAAAATAAGGCTTTAAATGAATTTAATATAGATTTAAAAGATTTAAAAGATATAGAGGATAT AAATATTCTTAATCAATTCAAACAAGACTTTAGTAAAGATTATGAATTTAAAGAACTAAATCTTAGCTTTGATACTAATT TAATCAAACTTTATTTTATTATCCCAAAAAACATTGCTAAAGTTTATAAAAGTGCTTATAAGGAATTTAAAAATAAAGAT TTAGGAGCAGGGTATTTTACACAGCTACATGAGTATGATAAAATCATCAAAAATGCTTTAGAAGATAATAAAGAATTAAA CGAATATCATTTTAGTTTTTTAACTCCTGCTAAAATGCAAAATTTAAAACTTCAAATCGCACAAGGACTAGATGAAATCT TAGAAGATGAAGATAGAAAACAAGAGCTTTATGTTTGTAAATTTGTGGTGGTAAATGGGGTTAAAATATGA
Upstream 100 bases:
>100_bases GATCAAATTTGGGATGAGCAATATTTAGGTGGAGTTTGTAAAATATCACAAGCTTTGTATTTTAATGGAAAAGCTAAAAT AGGTATTATTTAGGAAAATT
Downstream 100 bases:
>100_bases AAATAAAAAATTTTACTTTAATTGCATCAAATCATAATTTAGAAATCGAGTTAAAAAATCTTACCAAAAATGCTAATAAA ATTATTTTTATATGCAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLNSTLLTGSNELPNNPFYFGEL DQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDK KQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLI NNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKD LGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI
Sequences:
>Translated_476_residues MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLNSTLLTGSNELPNNPFYFGEL DQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDK KQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLI NNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKD LGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI >Mature_476_residues MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLNSTLLTGSNELPNNPFYFGEL DQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDK KQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLI NNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKD LGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54968; Mature: 54968
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLN CCCHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHEECCCCCCCHHHHCCCEEEEEEE STLLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLN EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEE YSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIH HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE GGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK CCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHH VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIR CCCCEEHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHCCCCCCCCCEECCCCEEE LHYKSDRFQKDNLPIYNLLINNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKD EEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCC YEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNAL CCEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI HCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEECCCCC >Mature Secondary Structure MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLN CCCHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHEECCCCCCCHHHHCCCEEEEEEE STLLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLN EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEE YSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIH HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE GGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK CCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHH VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIR CCCCEEHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHCCCCCCCCCEECCCCEEE LHYKSDRFQKDNLPIYNLLINNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKD EEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCC YEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNAL CCEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI HCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA