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The map label for this gene is glnM [H]

Identifier: 57237748

GI number: 57237748

Start: 934530

End: 935282

Strand: Reverse

Name: glnM [H]

Synonym: CJE0998

Alternate gene names: 57237748

Gene position: 935282-934530 (Counterclockwise)

Preceding gene: 57237749

Following gene: 57237747

Centisome position: 52.61

GC content: 32.01

Gene sequence:

>753_bases
ATGAATGAAAGTGTAGGTTTTGTTGAACATTTAAGACAAATTCTTACTTCTTGGGGTTTATATGATGAAAATAGTATAAG
CCCTTTTGCGGTATGGAAATTTTTAGATGCTTTGGATAATAAAGATGCTTTTATTAATGGTTTTATTTATACTTTAGAAG
TAAGCATTCTTGCTTTGCTTATAGCTACAATTTTTGGAACTATAGGCGGAGTTATGGCTACAAGTAGATTTAAAATTATC
AGAGCCTACACTAGAATTTACGTAGAGCTTTTTCAAAATGTTCCTTTGGTAATACAAATTTTCTTTTTGTTTTATGCCTT
GCCTGTTTTAGGTATAAGACTTGATATATTTACTATTGGTGTATTGGGTGTTGGAGCTTATCACGGAGCTTATGTAAGCG
AGGTGGTTAGAAGTGGAATTTTAGCTGTGCCAAGAGGTCAGTTTGAAGCTTCTGCTTCTCAAGGGTTTACTTATATTCAA
CAAATGCGTTATATTATAGTACCTCAAACCATTAGAATTATTTTACCACCGATGACAAATCAAATGGTAAATTTAATCAA
AAATACCTCTGTATTGCTTATTGTAGGTGGAGCTGAGTTAATGCATTCTGCTGATAGCTATGCAGCTGATTATGGAAATT
ATGCGCCAGCTTATATATTTGCAGCGGTTTTATATTTTATAATTTGTTATCCTTTGGCTTATTTTGCAAAGGCTTATGAA
AATAAACTAAAAAAAGCACATTTAACGAGATAA

Upstream 100 bases:

>100_bases
ACCAAAAAAGATGATCCAGCTTTTGCAAAATATGTTGATGATTTTGTAAAAGAACATAAAAATGAAATTGATGCTTTAGC
GAAAAAATGGGGTTTATAAT

Downstream 100 bases:

>100_bases
AGGGTTGTTAATGGAAAATGTTTTTAATGCGCAAAATATTGAATTTTTAATGCAAGGTTTATTTCTGACATTAAAAATAG
CCTTAGCAACTTGTATTATT

Product: amino acid ABC transporter permease PEB1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKII
RAYTRIYVELFQNVPLVIQIFFLFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPLAYFAKAYE
NKLKKAHLTR

Sequences:

>Translated_250_residues
MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKII
RAYTRIYVELFQNVPLVIQIFFLFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPLAYFAKAYE
NKLKKAHLTR
>Mature_250_residues
MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKII
RAYTRIYVELFQNVPLVIQIFFLFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPLAYFAKAYE
NKLKKAHLTR

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=31.4285714285714, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=31.219512195122, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=28.3653846153846, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786874, Length=196, Percent_Identity=32.1428571428571, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1786873, Length=194, Percent_Identity=29.3814432989691, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=26.6968325791855, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI48994930, Length=123, Percent_Identity=30.0813008130081, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788645, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787087, Length=211, Percent_Identity=21.8009478672986, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28014; Mature: 28014

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALL
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFFLFYALPVLGIRLDIFTIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTN
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEECCHHH
QMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPLAYFAKAYE
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NKLKKAHLTR
HHHHHHHCCC
>Mature Secondary Structure
MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALL
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFFLFYALPVLGIRLDIFTIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTN
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEECCHHH
QMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPLAYFAKAYE
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NKLKKAHLTR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]