Click here to switch to the map view.

The map label for this gene is pebA [H]

Identifier: 57237749

GI number: 57237749

Start: 935284

End: 936063

Strand: Reverse

Name: pebA [H]

Synonym: CJE0999

Alternate gene names: 57237749

Gene position: 936063-935284 (Counterclockwise)

Preceding gene: 57237750

Following gene: 57237748

Centisome position: 52.65

GC content: 31.03

Gene sequence:

>780_bases
ATGGTTTTTAGAAAATCTTTGTTAAAGTTGGCAGTTTTTGCTCTAGGTGCTTGTGTTGCATTTAGTAATGCTAATGCAGC
AGAAGGTAAACTTGAGTCTATTAAATCTAAAGGACAATTAATAGTTGGTGTTAAAAATGATGTTCCATATTATGCTTTAC
TTGATCAAGCAACAGGTGAAATTAAAGGTTTCGAAATAGATGTTGCCAAATTGCTAGCTAAAAGTATATTAGGTGATGAT
AAAAAAATAAAACTAGTTGCAGTTAATGCTAAAACAAGAGGCCCTTTGCTTGATAATGGTAGTGTAGATGCAGTGATAGC
AACTTTTACTATTACTCCAGAGAGAAAAAGAATTTATAATTTCTCAGAGCCTTATTATCAAGATGCTATAGGGCTTTTGG
TTTTAAAAGAAAAAAATTATAAATCTCTAGCTGATATGAAAGGTGCAAATATTGGAGTAGCTCAAGCTGCAACTACAAAA
AAAGCTATAGGTGAAGCTGCTAAAAAAATTGGCATTGATGTTAAATTTAGTGAATTTCCTGATTATCCAAGTATAAAAGC
TGCGTTAGATGCTAAAAGAGTTGATGCGTTTTCTGTAGACAAATCAATATTGTTAGGTTATGTGGATGATAAAAGTGAAA
TTTTGCCAGATAGTTTTGAACCACAAAGTTATGGTATTGTAACCAAAAAAGATGATCCAGCTTTTGCAAAATATGTTGAT
GATTTTGTAAAAGAACATAAAAATGAAATTGATGCTTTAGCGAAAAAATGGGGTTTATAA

Upstream 100 bases:

>100_bases
AAATATTCCTAGCGAATTTTTCTCAAATCCAAAAACTGAAAGAGCGCGACTCTTTTTAGGGAAAATTCTTAAAAATTAAC
CAAAATTGAAAGGAGAAAAA

Downstream 100 bases:

>100_bases
TATGAATGAAAGTGTAGGTTTTGTTGAACATTTAAGACAAATTCTTACTTCTTGGGGTTTATATGATGAAAATAGTATAA
GCCCTTTTGCGGTATGGAAA

Product: bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein

Products: NA

Alternate protein names: CBF1; PEB1 [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGEIKGFEIDVAKLLAKSILGDD
KKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTK
KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDSFEPQSYGIVTKKDDPAFAKYVD
DFVKEHKNEIDALAKKWGL

Sequences:

>Translated_259_residues
MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGEIKGFEIDVAKLLAKSILGDD
KKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTK
KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDSFEPQSYGIVTKKDDPAFAKYVD
DFVKEHKNEIDALAKKWGL
>Mature_259_residues
MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGEIKGFEIDVAKLLAKSILGDD
KKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTK
KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDSFEPQSYGIVTKKDDPAFAKYVD
DFVKEHKNEIDALAKKWGL

Specific function: Common antigen and a major cell adherence molecule. Most probably involved, with PEB1C, in a binding-protein-dependent transport system for an amino acid. May be involved in binding to intestinal cells [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell surface [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=263, Percent_Identity=30.7984790874525, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786876, Length=237, Percent_Identity=25.7383966244726, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787085, Length=228, Percent_Identity=27.6315789473684, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28204; Mature: 28204

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEEECCCCC
IKGFEIDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYN
CCCEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHCC
FSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFP
CCCCHHHHCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCC
DYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDSFEPQSYGIVTKKDDPAFAKYVD
CCCCHHHHHHHHHCCHHCCCCEEEEEEECCCHHCCCCCCCCCCCCEEECCCCCHHHHHHH
DFVKEHKNEIDALAKKWGL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEEECCCCC
IKGFEIDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYN
CCCEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHCC
FSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFP
CCCCHHHHCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCC
DYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDSFEPQSYGIVTKKDDPAFAKYVD
CCCCHHHHHHHHHCCHHCCCCEEEEEEECCCHHCCCCCCCCCCCCEEECCCCCHHHHHHH
DFVKEHKNEIDALAKKWGL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204; 1885571 [H]