| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is yfhP [C]
Identifier: 57237713
GI number: 57237713
Start: 897928
End: 898338
Strand: Reverse
Name: yfhP [C]
Synonym: CJE0963
Alternate gene names: 57237713
Gene position: 898338-897928 (Counterclockwise)
Preceding gene: 57237715
Following gene: 57237712
Centisome position: 50.53
GC content: 27.49
Gene sequence:
>411_bases GTGCTATTTACCAAAGCTAGCGAATACGCTTTACTTTCTTTAATTTATATTTCTCAAAAAGAAACACCTCAAGATGTAGA TTCTTTAGCTTTAGAGCTTGATATTCCTAAAAGTTTTTTAGCTAAAATTTTACAAACTTTAGCTAAAGATGGCTTGTTAA AATCCTTTAAAGGGGCAAAAGGTGGTTTTGTTTTAATCAAAGAACCAAGTCAATATACTATAAAAGAAATTGTTAATAGT GCTGAAAAAAAGGATATCAGTGTATTTGAATGCAGTGGTGGCACTTGTCCAAATAATAAAGAAGAAAATTGCACCTTAAT GCCTATGTTAGTAAATTTACAAAATAAAGTAGATGAATTTTTAGATTCTATTACTTTAGAAGATATTATGAAAAATAATG GCAAAAAATAA
Upstream 100 bases:
>100_bases AATTTATCTTTTTTAGAAGGTTTTGTCAAAATTTAAGTCTTTTTCTAAGAATTATTTATTATAATTACAGCTATTTCTGT AGTTATAACAAGGAGAATCT
Downstream 100 bases:
>100_bases AATAGTCGATTTAGTTTTTCCTTTCTTGGGGCCTTTAATCGCTCCTGTTTTAAAAGCTAAAAGCTTGACTATTGTTGGTT TTTTAGTTTGTATTTTAGCT
Product: RrF2 family protein
Products: NA
Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator Badm/Rrf2 Family; Rrf2 Family Protein; Transcriptional Regulator; RrF2 Family Protein; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Rrf2 Family; Transcription Factor IscR
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNS AEKKDISVFECSGGTCPNNKEENCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK
Sequences:
>Translated_136_residues MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNS AEKKDISVFECSGGTCPNNKEENCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK >Mature_136_residues MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNS AEKKDISVFECSGGTCPNNKEENCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15110; Mature: 15110
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS01332 UPF0074
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQTLAKDGLLKSFKGAK CCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC GGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEENCTLMPMLVNLQNKVDEF CCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHH LDSITLEDIMKNNGKK HHHHHHHHHHHCCCCC >Mature Secondary Structure MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQTLAKDGLLKSFKGAK CCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC GGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEENCTLMPMLVNLQNKVDEF CCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHH LDSITLEDIMKNNGKK HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA