| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237641
Identifier: 57237641
GI number: 57237641
Start: 825725
End: 826444
Strand: Reverse
Name: 57237641
Synonym: CJE0887
Alternate gene names: NA
Gene position: 826444-825725 (Counterclockwise)
Preceding gene: 57237642
Following gene: 57237640
Centisome position: 46.49
GC content: 31.25
Gene sequence:
>720_bases ATGGCTCAAACTCAACTTTCTTATAAAAACAAAACTTATCAAATTTCTTATGAAATTTTAGGTGATCTTACCTTACCGCA AATACTTATCTTACACGGCTGGGGAGCCAATAAAGAACTTATGAAGCAAAGTTTTTATCCTTTTTTGAAAGACTTTTGTC AAATTTATATGGATTTGGCGGGTTTTGGAAATTCAAGTGTGGAAGAAATTTTAAACACTCAAGATTATGCCAATATCACA GAACTTTTTTTAAAACAAAAAAAACTCAATGTCTGTTTTTTCATGGGGCATTCTTTTGGTGGAAAAGTAAGCACCCTACT CGCAAAAGAAAAAGACACCCTAATCTTACTTTCAAGTGCAGGAATTTTAGCTAAAAAATCCCTAAAAGTGCGTTTTAAAA TCCGTATTTTTAAAATTTTAAAACTCTTTGGTTTGGGAAAATTTTATCGCTATTTTGCTAGTAAAGATGGAGCAAATCTT AGCCCTATGATGTATGAAACCTTTAAAAATGTTGTTGATGAGGATTTTGGTGAAATTTTTGCCAAGCAAAAGGCTAAAAG CTTGGTTTTTTGGGGAAAAAGCGATGAAGCCACGCCTTTGTATTGTGGTGAAAAAATGCATCAACTTTTAAAAAATAGCA CTTTTTATCCTTTAGAGGGGGATCATTTTTTCTTTTTAAAATATTCTGCTTTCATAGCTCAAAAAATTAAGGAAATTTAA
Upstream 100 bases:
>100_bases AACAAATTTGAAGCTGTAATGCTTAGCATGAAGGAATTTGAACGCTTACAAAACGCCATGCAACTTTTAGAAAATATCTA CAAAAATCAAAAGGCTTAAA
Downstream 100 bases:
>100_bases ATGCTTATCAATACTCTTTATTTTATCAATTCTTTATTTTTTAATTTTTGCATAGCTTTTTATCTTATGAGTGCTTTACA ATGGTATTCTTATAAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Carboxylesterase BioH; Alpha/Beta Fold Family Hydrolase; Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAQTQLSYKNKTYQISYEILGDLTLPQILILHGWGANKELMKQSFYPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANIT ELFLKQKKLNVCFFMGHSFGGKVSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANL SPMMYETFKNVVDEDFGEIFAKQKAKSLVFWGKSDEATPLYCGEKMHQLLKNSTFYPLEGDHFFFLKYSAFIAQKIKEI
Sequences:
>Translated_239_residues MAQTQLSYKNKTYQISYEILGDLTLPQILILHGWGANKELMKQSFYPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANIT ELFLKQKKLNVCFFMGHSFGGKVSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANL SPMMYETFKNVVDEDFGEIFAKQKAKSLVFWGKSDEATPLYCGEKMHQLLKNSTFYPLEGDHFFFLKYSAFIAQKIKEI >Mature_238_residues AQTQLSYKNKTYQISYEILGDLTLPQILILHGWGANKELMKQSFYPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITE LFLKQKKLNVCFFMGHSFGGKVSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANLS PMMYETFKNVVDEDFGEIFAKQKAKSLVFWGKSDEATPLYCGEKMHQLLKNSTFYPLEGDHFFFLKYSAFIAQKIKEI
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27512; Mature: 27380
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTQLSYKNKTYQISYEILGDLTLPQILILHGWGANKELMKQSFYPFLKDFCQIYMDLA CCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GFGNSSVEEILNTQDYANITELFLKQKKLNVCFFMGHSFGGKVSTLLAKEKDTLILLSSA CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECC GILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANLSPMMYETFKNVVDEDFGEIF CEEECCCEEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AKQKAKSLVFWGKSDEATPLYCGEKMHQLLKNSTFYPLEGDHFFFLKYSAFIAQKIKEI HHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCC >Mature Secondary Structure AQTQLSYKNKTYQISYEILGDLTLPQILILHGWGANKELMKQSFYPFLKDFCQIYMDLA CCCCCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GFGNSSVEEILNTQDYANITELFLKQKKLNVCFFMGHSFGGKVSTLLAKEKDTLILLSSA CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECC GILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANLSPMMYETFKNVVDEDFGEIF CEEECCCEEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AKQKAKSLVFWGKSDEATPLYCGEKMHQLLKNSTFYPLEGDHFFFLKYSAFIAQKIKEI HHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA