Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57237553

Identifier: 57237553

GI number: 57237553

Start: 503107

End: 503547

Strand: Reverse

Name: 57237553

Synonym: CJE0551

Alternate gene names: NA

Gene position: 503547-503107 (Counterclockwise)

Preceding gene: 57237554

Following gene: 57237552

Centisome position: 28.32

GC content: 24.94

Gene sequence:

>441_bases
ATGAAAGAAAAAGAATTTAGCGTAGATTTAGTAAATAATCCACCGCATTATAAAGGTTTTGGATTTGAAAATTTAGACTT
TTTGGAAGAAATTTTTAATATTATGCCTGAAAAAAGAATTGTTTTTCACATAGGCAATGCTTTAAAATACGCTATTCGTA
GCAAGTTTAAAGGATATGAGATGCAAGACTTAGAAAAATGTGAGTTTTATGTAAAAAGATGCGAGAGATTTATTTCAATG
GAAAGGCCTGTAGAATGTTATAAAAGTATTGTAATATATTTAAGTTTAATATCTCAAAAGGATTTTAAACTTTATATTTT
AATAAACGATATTTGCAGTTTTGCTCTAAATCCTTCTCAAAGAAATTACAACGCTTTAATAAATAGTCTTAAAAAATATA
TTAGAGAAAGAAAGAATGCTAATGAAACCAAATTTATATAA

Upstream 100 bases:

>100_bases
TTAAAAAAATACCTTTAAAAATTTAAAAGCGGAAATGCTGTTTTAATACTAATATTTATGATTTTATAAAGATGTGTAAA
AAGGCTAAACAAGGATAATA

Downstream 100 bases:

>100_bases
CGACCATTTTCAAAATTTTAAAAGATATAATATACCAAAAGCACAGCTTATAATAGCTGATATTCCTTATAATTTAGGCA
ACAATGCTTATGCTTCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKEKEFSVDLVNNPPHYKGFGFENLDFLEEIFNIMPEKRIVFHIGNALKYAIRSKFKGYEMQDLEKCEFYVKRCERFISM
ERPVECYKSIVIYLSLISQKDFKLYILINDICSFALNPSQRNYNALINSLKKYIRERKNANETKFI

Sequences:

>Translated_146_residues
MKEKEFSVDLVNNPPHYKGFGFENLDFLEEIFNIMPEKRIVFHIGNALKYAIRSKFKGYEMQDLEKCEFYVKRCERFISM
ERPVECYKSIVIYLSLISQKDFKLYILINDICSFALNPSQRNYNALINSLKKYIRERKNANETKFI
>Mature_146_residues
MKEKEFSVDLVNNPPHYKGFGFENLDFLEEIFNIMPEKRIVFHIGNALKYAIRSKFKGYEMQDLEKCEFYVKRCERFISM
ERPVECYKSIVIYLSLISQKDFKLYILINDICSFALNPSQRNYNALINSLKKYIRERKNANETKFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17506; Mature: 17506

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKEFSVDLVNNPPHYKGFGFENLDFLEEIFNIMPEKRIVFHIGNALKYAIRSKFKGYE
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCC
MQDLEKCEFYVKRCERFISMERPVECYKSIVIYLSLISQKDFKLYILINDICSFALNPSQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCC
RNYNALINSLKKYIRERKNANETKFI
CCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKEKEFSVDLVNNPPHYKGFGFENLDFLEEIFNIMPEKRIVFHIGNALKYAIRSKFKGYE
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCC
MQDLEKCEFYVKRCERFISMERPVECYKSIVIYLSLISQKDFKLYILINDICSFALNPSQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCC
RNYNALINSLKKYIRERKNANETKFI
CCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA