| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237517
Identifier: 57237517
GI number: 57237517
Start: 465701
End: 466921
Strand: Direct
Name: 57237517
Synonym: CJE0513
Alternate gene names: NA
Gene position: 465701-466921 (Clockwise)
Preceding gene: 57237516
Following gene: 57237518
Centisome position: 26.19
GC content: 27.85
Gene sequence:
>1221_bases ATGCAGTATTTAGAGAGTAGGGGTATTAAAATCCCTTTTATTTTTGAAAAAAATTCTGATTTTCCTATTGTTGTTTTAAA GCTTGTTTTTAGAAATTGTGCTAGAAGTTATGATGAAATAGCAGGCTTAGCTAAGATGTTTTCACGTATTTTAAATGAAG GCGTGGATGATAAATTTTTTAAGGATTTAGAATTTAGAGCGATAAATTTAGAGGCAAGTAGTGGTTTTGAAAGTTTGGAA ATCAATCTTTCTTGTTTAAAAGAAAATTTTGATTTTGCTTTAAAGAGCTTGGAAAAATTGCTTTTAAAACCAAGAATAGA AGAAAAAATTTTGCAAAAATTAAAAATCAATGCCTTAGGTGAGCTCGCGAGTAAAAATAGTGATTTTGATTATTTAGCAA AAAATTTACTTAATGCTCAAATTTTTAAATGCAAAGAATTTCAAAGCTCAAACGATGGAGATGAAAAAAGTATAGAAATC TTATCTTTAAAAGATTTACAAAATTTTTATAAAAATTTTATCCATCTTAGTGATTTGGTTGTGATTTTAGGAGGAGATTT AGAAGAAAAACAAGCCAAGGAAGATCTTTTAAAACTCTTATCAAAACTTCAAATAGGCAAAAAAAATACTCCAAAAAAAT ATGAATTAAGCAAAAACATTAAAGATGAAATTTTGATACGCCCAGAAAGCGAACAAGCTTATATTTATTTTGCTACGCCT TTTTTTGCTGATTTTAAAGATAAGGATTTATATCTTGCAAAAATTGCTTTATTTGTTCTAGGGCAAGGGGGGTTTGGTTC AAGGATTATGGAAGAAATTCGTGTTAAAAGAGGTCTTGCATACTCAGCTTATGCTATGCTTGATATGAATATGTCTTTTT CTAGAGTTTTTGGATATTTACAAACTAAAAATGAAAGCGCTAAAGAAGCTAAAAAAATCGTAAAAGAGCTTTTTGAAGAT TTTATAAAAAATGGCATGACTCAAAATGAACTTGATCAAGCTAAAAATTTTCTCATAGGATCAACTCCTTTGCGTTATGA AGGCTTAAGCAAGCGTTTATCTATGGCCTTTAATGAATTTTATCAAGGTTTAAATTTGGGATATTATAAAGAAGAGTTAA AACTTATGGAAAAGGTTAAACTTGAAACCATCAATGCTTATATTAACAAACATCAAGAGCTTTTAAATATAAGTTTTGCA AGCATACAAAATGAAAATTAA
Upstream 100 bases:
>100_bases GTTATAGAATGAATCAAGATGAGATGATAAGGCTGATTAGAAGTTTAGGCGAAAATCCAGCTAAACGCAATACCGCTTAT GAAATTTTAGAAAGGTTTTA
Downstream 100 bases:
>100_bases AGAAAGTGATTTTGAATTTTTTAAAAAATTAAAAATTAAAAGTGCTATTGATTTAGCGCTTCTTTTACCTAAAAAAATTG AAAATTTAAATCCAAGTAAA
Product: peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLAKMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLE INLSCLKENFDFALKSLEKLLLKPRIEEKILQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSSNDGDEKSIEI LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSKNIKDEILIRPESEQAYIYFATP FFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVKRGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFED FIKNGMTQNELDQAKNFLIGSTPLRYEGLSKRLSMAFNEFYQGLNLGYYKEELKLMEKVKLETINAYINKHQELLNISFA SIQNEN
Sequences:
>Translated_406_residues MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLAKMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLE INLSCLKENFDFALKSLEKLLLKPRIEEKILQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSSNDGDEKSIEI LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSKNIKDEILIRPESEQAYIYFATP FFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVKRGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFED FIKNGMTQNELDQAKNFLIGSTPLRYEGLSKRLSMAFNEFYQGLNLGYYKEELKLMEKVKLETINAYINKHQELLNISFA SIQNEN >Mature_406_residues MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLAKMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLE INLSCLKENFDFALKSLEKLLLKPRIEEKILQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSSNDGDEKSIEI LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSKNIKDEILIRPESEQAYIYFATP FFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVKRGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFED FIKNGMTQNELDQAKNFLIGSTPLRYEGLSKRLSMAFNEFYQGLNLGYYKEELKLMEKVKLETINAYINKHQELLNISFA SIQNEN
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 46855; Mature: 46855
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLAKMFSRILNEGVDDKFF CCCCHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLLKPRIEEKILQKLKINALG HCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ELASKNSDFDYLAKNLLNAQIFKCKEFQSSNDGDEKSIEILSLKDLQNFYKNFIHLSDLV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHH VILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSKNIKDEILIRPESEQAYIYFATP EEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCEEEEEECC FFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVKRGLAYSAYAMLDMNMSFSRVFGYL HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHH QTKNESAKEAKKIVKELFEDFIKNGMTQNELDQAKNFLIGSTPLRYEGLSKRLSMAFNEF HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH YQGLNLGYYKEELKLMEKVKLETINAYINKHQELLNISFASIQNEN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLAKMFSRILNEGVDDKFF CCCCHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLLKPRIEEKILQKLKINALG HCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ELASKNSDFDYLAKNLLNAQIFKCKEFQSSNDGDEKSIEILSLKDLQNFYKNFIHLSDLV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHH VILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSKNIKDEILIRPESEQAYIYFATP EEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCEEEEEECC FFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVKRGLAYSAYAMLDMNMSFSRVFGYL HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHH QTKNESAKEAKKIVKELFEDFIKNGMTQNELDQAKNFLIGSTPLRYEGLSKRLSMAFNEF HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH YQGLNLGYYKEELKLMEKVKLETINAYINKHQELLNISFASIQNEN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]