| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is recG [H]
Identifier: 57237518
GI number: 57237518
Start: 466911
End: 468734
Strand: Direct
Name: recG [H]
Synonym: CJE0514
Alternate gene names: 57237518
Gene position: 466911-468734 (Clockwise)
Preceding gene: 57237517
Following gene: 57237520
Centisome position: 26.26
GC content: 29.71
Gene sequence:
>1824_bases ATGAAAATTAAAGAAAGTGATTTTGAATTTTTTAAAAAATTAAAAATTAAAAGTGCTATTGATTTAGCGCTTCTTTTACC TAAAAAAATTGAAAATTTAAATCCAAGTAAAAATCCTAAAGAAAATGAAATTTGCACCCAAAAAATCACTATAAAAAGCG TTAGTTCAAGAAAAAATCAACTTTTTGGTTTAGGTTTTTGTGAAGAATGGCAAGAAAATATTTCTTTTGTGTTTTTTCAT CCTAGAGCTTGGCATTTTGGGATTTGTAAGGTAGGAAAAGGGCTTATTTTTAATGCTAAACTCTCGCGTTTTAATCACAC TTGGCAATTTAACAATCCTAAAATTTTAACTTCTTTTGAGGGTTTTAGTCCAAAGTATCAAATTTTAGGTTTAAAAGATG CAAAAATTGCTGCTTTTATACATAAATATCTTAATTATGAAAATTTACAAGAAAGTGGCATAGGGGATAAATATATACAT TTTCTTTTAAATTTGCATGCTTATGATGAAAAAAGTTTTTTTATGTTTGAAAATTTGCAAAATTTTAGCAAAGATTTAAA ATATATAGAAATATATAATTTTTTAAAGCGTTTAAAAGCTAAAAAAACACATTTTAAAGCTCATCAAATCAATGTTTTTA ACATAGCTAATTGGCTTAAAGATTTGCCTTTTTCTCTTACTAAAGATCAGCTTAATGCCTTAAAAGATATAGAAAAAGAT TTGCATTCAAAAGAAGCTAGAAGGCGTGTAATTATGGGTGATGTAGGGTGTGGTAAAACCTTGGTTTTGCTTGGTGCGGC TTTGATGGTTTATCCTAAACAAGCTATTTTGATGGCACCTACTAGTATTTTAGCGCATCAGCTTTATGAAGAGGCTAAGA AATTTTTGCCTGATTTTATGAATATTTTGTTTATTAAAGGGGGTAAAAAAGAAAAAGATTTAGAACAAAATATTCAAAAA GCAAATCTTATTATAGGTACTCATGCTTTAATTCATTTAGAAAGCCATAATGCCGTACTTGTAATGATAGATGAACAACA TCGTTTCGGCTCGGCTCAGCGTGAGAAAATTTATTCTTTAAGTAAACAAGAATTTGCCCCTCATTTTATACAGTTTTCGG CTACGCCTATTCCAAGAACCTTAAGCATGATACAATCTGAACTTTTAAATTTTAGTTTCATTAAACAAATGCCTTTTAAA AAAGATATCACAACTTATTGTATACAAAATGAAGACTTTTCTAAGCTTAGCGAGAAGATTAAAGAAGAAATCGCTAAAAA TCATCAAATTATCATTATTTATCCCTTAGTGAGTGCTAGTGATAATATTCCTTATCTTTCTTTAGAGCAGGCTAAAGAAT ATTGGCAGAGTCACTATGAAAAAGTTTTTGTAACTCATGGGAAAGATAAACAAAAAGATGAAATTTTAGAGCGTTTTAGA GATGAGGGAAATATTTTACTAAGCACTACAGTGGTGGAAGTGGGCATTTCTTTGCCAAGATTGAGTATGATAGTGATTGT AGGAGCGGAACGTTTAGGACTTGCTACCTTGCATCAACTTCGTGGTCGTGTAGGTCGTGTAGGGCTTAAAAGCACTTGTT ATCTTTATACTAAACTTAAAGAAATTCCAAGTCGTTTAAAAGAATTTGCTAGCACTTTAGATGGGTTTAAAATAGCAGAG CTTGATCTTAAAAACCGTTTGAGTGGAGATTTGCTCGATGGTTTTATGCAACATGGAAATGAGTTTAAATTTTTTGATTT TTCTAAGGATGAGGAGATTTTAGAAAAGGTAAAAAAAGATTTGGCAAAAAAAATGCCAAATTAA
Upstream 100 bases:
>100_bases GAAGAGTTAAAACTTATGGAAAAGGTTAAACTTGAAACCATCAATGCTTATATTAACAAACATCAAGAGCTTTTAAATAT AAGTTTTGCAAGCATACAAA
Downstream 100 bases:
>100_bases TGTCCACCATACTTATAAAGCATATTTTGAAAATGTGAAGCTATCATTTGTGCACGCTGTAAAATAACTGTTTTCATTTC TTCATTATAAACTATATTTA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MKIKESDFEFFKKLKIKSAIDLALLLPKKIENLNPSKNPKENEICTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFH PRAWHFGICKVGKGLIFNAKLSRFNHTWQFNNPKILTSFEGFSPKYQILGLKDAKIAAFIHKYLNYENLQESGIGDKYIH FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKD LHSKEARRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAHQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQK ANLIIGTHALIHLESHNAVLVMIDEQHRFGSAQREKIYSLSKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFK KDITTYCIQNEDFSKLSEKIKEEIAKNHQIIIIYPLVSASDNIPYLSLEQAKEYWQSHYEKVFVTHGKDKQKDEILERFR DEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAE LDLKNRLSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKDLAKKMPN
Sequences:
>Translated_607_residues MKIKESDFEFFKKLKIKSAIDLALLLPKKIENLNPSKNPKENEICTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFH PRAWHFGICKVGKGLIFNAKLSRFNHTWQFNNPKILTSFEGFSPKYQILGLKDAKIAAFIHKYLNYENLQESGIGDKYIH FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKD LHSKEARRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAHQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQK ANLIIGTHALIHLESHNAVLVMIDEQHRFGSAQREKIYSLSKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFK KDITTYCIQNEDFSKLSEKIKEEIAKNHQIIIIYPLVSASDNIPYLSLEQAKEYWQSHYEKVFVTHGKDKQKDEILERFR DEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAE LDLKNRLSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKDLAKKMPN >Mature_607_residues MKIKESDFEFFKKLKIKSAIDLALLLPKKIENLNPSKNPKENEICTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFH PRAWHFGICKVGKGLIFNAKLSRFNHTWQFNNPKILTSFEGFSPKYQILGLKDAKIAAFIHKYLNYENLQESGIGDKYIH FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKD LHSKEARRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAHQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQK ANLIIGTHALIHLESHNAVLVMIDEQHRFGSAQREKIYSLSKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFK KDITTYCIQNEDFSKLSEKIKEEIAKNHQIIIIYPLVSASDNIPYLSLEQAKEYWQSHYEKVFVTHGKDKQKDEILERFR DEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAE LDLKNRLSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKDLAKKMPN
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=429, Percent_Identity=34.7319347319347, Blast_Score=191, Evalue=2e-49, Organism=Escherichia coli, GI1787357, Length=396, Percent_Identity=30.5555555555556, Blast_Score=155, Evalue=8e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 70265; Mature: 70265
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKESDFEFFKKLKIKSAIDLALLLPKKIENLNPSKNPKENEICTQKITIKSVSSRKNQ CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHEEEHHHHCCCCC LFGLGFCEEWQENISFVFFHPRAWHFGICKVGKGLIFNAKLSRFNHTWQFNNPKILTSFE EEECCCHHHHHCCCEEEEECCCCCEEHHHHHCCCEEEEEEHHHCCCEEEECCCEEEEEEC GFSPKYQILGLKDAKIAAFIHKYLNYENLQESGIGDKYIHFLLNLHAYDEKSFFMFENLQ CCCCCEEEEECCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH NFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKD HHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LHSKEARRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAHQLYEEAKKFLPDFM HHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCHHHEECHHHHHHHHHHHHHHHHHHHHH NILFIKGGKKEKDLEQNIQKANLIIGTHALIHLESHNAVLVMIDEQHRFGSAQREKIYSL HEEEEECCCCCHHHHHHHHHHHEEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHH SKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFKKDITTYCIQNEDFSKLSEKI HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHH KEEIAKNHQIIIIYPLVSASDNIPYLSLEQAKEYWQSHYEKVFVTHGKDKQKDEILERFR HHHHHCCCCEEEEEEEECCCCCCCEEEHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHH DEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATLHQLRGRVGRVGLKSTCYLYTKLK CCCCEEEEEHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH EIPSRLKEFASTLDGFKIAELDLKNRLSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKD HHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH LAKKMPN HHHHCCC >Mature Secondary Structure MKIKESDFEFFKKLKIKSAIDLALLLPKKIENLNPSKNPKENEICTQKITIKSVSSRKNQ CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHEEEHHHHCCCCC LFGLGFCEEWQENISFVFFHPRAWHFGICKVGKGLIFNAKLSRFNHTWQFNNPKILTSFE EEECCCHHHHHCCCEEEEECCCCCEEHHHHHCCCEEEEEEHHHCCCEEEECCCEEEEEEC GFSPKYQILGLKDAKIAAFIHKYLNYENLQESGIGDKYIHFLLNLHAYDEKSFFMFENLQ CCCCCEEEEECCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH NFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKD HHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LHSKEARRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAHQLYEEAKKFLPDFM HHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCHHHEECHHHHHHHHHHHHHHHHHHHHH NILFIKGGKKEKDLEQNIQKANLIIGTHALIHLESHNAVLVMIDEQHRFGSAQREKIYSL HEEEEECCCCCHHHHHHHHHHHEEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHH SKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFKKDITTYCIQNEDFSKLSEKI HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHH KEEIAKNHQIIIIYPLVSASDNIPYLSLEQAKEYWQSHYEKVFVTHGKDKQKDEILERFR HHHHHCCCCEEEEEEEECCCCCCCEEEHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHH DEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATLHQLRGRVGRVGLKSTCYLYTKLK CCCCEEEEEHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH EIPSRLKEFASTLDGFKIAELDLKNRLSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKD HHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH LAKKMPN HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]