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The map label for this gene is sdhC [H]

Identifier: 57237495

GI number: 57237495

Start: 446311

End: 447168

Strand: Direct

Name: sdhC [H]

Synonym: CJE0490

Alternate gene names: 57237495

Gene position: 446311-447168 (Clockwise)

Preceding gene: 57237494

Following gene: 57237497

Centisome position: 25.1

GC content: 33.57

Gene sequence:

>858_bases
ATGCAAAAAGAGTACGCTTTTTTTCCAGGTTGTGTTTTATCTCAAGCTGCAAAAGAATCTAAAATTTCACTTGAAGCTAT
TGCACCTATTTTGGGTTGGAAGTTGAATGAAATTAAGGGGTGGAGTTGTTGTGGGGCTTCTCAAGCGCAGTGTGTTGATC
CTATTGCGACTTTGGTAGCTAATGCAAGAAATATTGCTTTAGCAGAAGAGATGAAAATGCCAATGCTTACAACTTGTAGT
ACTTGTATGCTAACTTTAGCTAAAGCAAAAAATACTCTTGATAAGGGTGCAAAAGAACGCATCAATACTTTTTTAGCAAA
AGGTGGAATGAAATATCAAGGTTCAACGCCTATTACAAGTCTTTTGTGGGAGCTTTATGAGGATTTGGATAATTTAAAAA
GCAAGGTGAAAAAGCCGCTTTCAAATTTAAAAGTAGCTTTATTTTATGGTTGCCATAGTTTAAGACCTGAAGATGCTTTC
GGTAAAAAAGAAAGTTCAACCAATCCAAAAAGTTTTGAAAGTGTAGTAGAAGTTTTAGGGGCTAAAATAGTTCCTTTTGA
AAAACGCCTTGATTGTTGTGGTTTTCATGCTTCTTATCCTGCAGAAAAATCTGTGAAAAAAATGTCTAGTCAAATTGTCA
ATAATGCAAGTGAAAATCAAGCTGATTGTGTTGTAACACCTTGTCCACTTTGTCAAATGCAGCTTGATATCTATCAAGAA
AGATTTCAAGATTATACTAATTCTAAAGCAAGATTGCCTATTATTCATTTATCACAATTAGTAGGACTTGCATTAGGACT
TTCTAAAGAAATGGTTGGTTTAGATTATAATATTATTGATGCAAGTAAAATTGCATAA

Upstream 100 bases:

>100_bases
GAATCCTATGCATGTTTTTGGCGAGGGTGAAATAGAAGGGCATAAAGATTTGGTTAAAATGATAAAGGCGGCACAAGAAG
CTGCTGTTAAGGAGTAAAAT

Downstream 100 bases:

>100_bases
AAACATGGGCAAAAAGCCCATGTTTAAAGATTTAATTCCATTCTTAAAGAATGCTCCCAAAAAGCCACTTCTAAGCGTGT
TACAGTATGAAAAATTTCGC

Product: succinate dehydrogenase, C subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCCGASQAQCVDPIATLVANARNIALAEEMKMPMLTTCS
TCMLTLAKAKNTLDKGAKERINTFLAKGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASENQADCVVTPCPLCQMQLDIYQE
RFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDYNIIDASKIA

Sequences:

>Translated_285_residues
MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCCGASQAQCVDPIATLVANARNIALAEEMKMPMLTTCS
TCMLTLAKAKNTLDKGAKERINTFLAKGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASENQADCVVTPCPLCQMQLDIYQE
RFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDYNIIDASKIA
>Mature_285_residues
MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCCGASQAQCVDPIATLVANARNIALAEEMKMPMLTTCS
TCMLTLAKAKNTLDKGAKERINTFLAKGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASENQADCVVTPCPLCQMQLDIYQE
RFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDYNIIDASKIA

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31320; Mature: 31320

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCCGASQAQCVDPIATLVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHH
NARNIALAEEMKMPMLTTCSTCMLTLAKAKNTLDKGAKERINTFLAKGGMKYQGSTPITS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAFGKKESSTNPKSFESVVEVLG
HHHHHHHHHHHHHHHHHHHHHHHHEHEEECHHCCCCCHHCCCCCCCCCHHHHHHHHHHHC
AKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASENQADCVVTPCPLCQMQLDIYQE
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
RFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDYNIIDASKIA
HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCC
>Mature Secondary Structure
MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCCGASQAQCVDPIATLVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHH
NARNIALAEEMKMPMLTTCSTCMLTLAKAKNTLDKGAKERINTFLAKGGMKYQGSTPITS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAFGKKESSTNPKSFESVVEVLG
HHHHHHHHHHHHHHHHHHHHHHHHEHEEECHHCCCCCHHCCCCCCCCCHHHHHHHHHHHC
AKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASENQADCVVTPCPLCQMQLDIYQE
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
RFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDYNIIDASKIA
HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]