| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237445
Identifier: 57237445
GI number: 57237445
Start: 393210
End: 395672
Strand: Direct
Name: 57237445
Synonym: CJE0439
Alternate gene names: NA
Gene position: 393210-395672 (Clockwise)
Preceding gene: 57237444
Following gene: 57237453
Centisome position: 22.12
GC content: 29.23
Gene sequence:
>2463_bases ATGGCTGAACAAGAAGATATAATACTAGAAAAACCCGAAGATGGCTTAAATCAACCAAGACTTGATGAGAGTTTAGAGGG ATTTAAAGGGCAAGAGGGTCAAGCTCCAGAAGATGAAGAATTTGCATCATTGCCAGAAGAATTACCTCAAGAAAATAGTG AAAGTGGTTTTAAATTTACAAGAGAAAGTGCGCCTGAAGATGTATCAACTTTTGAAGAAGTTGAAAGTCAAGAGCCTACG CCTTGGTATAAAGATCGTAAGTTTATGTCTCTTGTGGGTTTATCTTTGGGGATTATTTGTATTTTAGTTTTTACACTTTT TTATTTAACTTTTAGTGAAGGAAAAATTAAACCAGATATTATAGCTTCTAAGACTTTAGAACAACCTGTTATTATGCCTG ATGAATCATATAAATACAATGATATGCAAAGAATTGATGGTATGATCCAAAAAGCAAATGCTTTATATTTAAAGGGTGAG GTTGAACAGGCTTTAAAAGTTTATGAGCAAGTTGCCGTATATAACGAATCTTTATCTAATTATAATTTAGGCGTTTCTCA AATGAATGAGAATAAATTCCAAGAAGCTTTTGAAAGCTTCAAGAAAGCTATAGCCAATGGAGAAAATCAAAGTGTAGCTG CTATCAATGCTGCTGTTTGTGCTTTAAAGCTTAATGATAAGGAAAAATTTAGATATTATATTGATTTAGCTCAAGTGTAT CTTCCAAAAGAAGGAAAATCAAAATTATATGATTATTATTTAAGCTTGATTAATTATTACAAAGGATATTACCCTGAGGC CTTGCAAATGTTACAAAGAACAGATGTGGAGCCGTATTCTGATGTTGCAAAGTATTTGTCTGCTAAAATTTATGCAAAAA TGGACTTTGATTCCAAGGCTATACAGCAATTAAATTCTCAAGGTAATTTTGAATCTAGTTTATCTTTAGGTCTTTTATAC GCTAGAATAGGAGAATATGCTAAAGCTAAAGTCGCTTTAAGTACAGCGATGAAAATTGAAAGAGATTTTAATCAGAGTTT AGCGGCTTTAACATTGGTTGATATTAAAACAGGAAATTATCAAGATATGTTAGCGCGCTTGCAAAATTCTTATGATAACG ATAAAGATAGATATAAGATTTTAGATACTTATAAAATTCAAGTTCGTTTAAATAAGGATCTTTTTAATATAGCAGTTGCT CAAAATTCTTTTTCAAAAGATTTGCTAAAAAAACAAAAAGATCAATTCGATTTGCTTTTTTATTTTGCACCTTATCAGGT TTTTGATAGTAAGCAGGCTGCTTTATATATTAAAAAAGCTAATGTTACAGATTTCGTTGATGATAGTACTGATGCGGGAA TTTATCTTAATATAAGCAAAGCTTTTTCATCTACCAATGTAAAAATTGCCAATATTATTAACTATGCATTAAATCAGAAG TTACGCCTTGCTAACCAAGAATTTCAAAAACTTATCAAGGATTATCCAGAACATAGTATTTTACATTATAATTTGGCTTT AACTTATGCCCAAGTGCAAAATTATGAACTTGCTTATAAGCATTTTTCAAGTTCATATCATCTTAATCCTAAAAATTACT TAGCAGGTGCTTTTGCTATGTTTTGTGCAAAATTAATTGATATTGATACAACTAAACTTTACAATGAAATTCTTGATAAT ATAGCTGCTGATTCTAATTTTAAAGCTAATATGCAAAAAAGTATGTTATTTTTAGTTAATAATAATTATATTTCTATGCT TCCTTATTTAGATGAAATAAAAAAAGATACGCCTTTGAGTTTGATTTTTGAAGCTATTATTGCTAAAAATAATAACCTTA ATAATCAAGTAGATGTGAAAATTGCTAAATTGCGTTCAGAGTTGCCTGAAGATATTTTGGCAAATATTTTGTATTTTAAT TCTTTAAATTCAAATTTAAATATTAAAGAATATGCTCAAAATGCTCAAATTCATTTTAAAAATTTAAAACTTGATTATCG TAGTGTTTTTGGTGGGCCAAATATAGCTAGGGAATTTTATGTTAATTTAATGCATATTGCAGGGCTTTTAAATTTAGAAA GACAGAAATTTAAAGAGTTGATTAATGTTTCAGGAGCAAAAGATGAGGGTATTTTACAAACTTTAGCTTATTTGGATATT TTTGCACAGCAATACGAGGAGGCTTATGCGCTTTATAATTCTTTGATTGATGATTATGGAGCTAAAGATACTAAAACTTT ATTTTTAGCAGCCGTAGCAGCCGTAGGTGCAAATAATCCAAATTCAGCTATAGCGCTTTTGCAGCTTTCTAAACTTACAG ATAAAAATAACAAAGAGAGTAAAGCAGCTCTTGGTATGTTGTATCAAGAAGTAAAGAACTATGAAGCTGCGATATCTCAG TATAAAACTTTACCTAATAATTTTAAGAGTGAATTTTTTACTTTTGATATTAATAACAACTAA
Upstream 100 bases:
>100_bases AGTAGGAAGAACCTTGGTAGCGATTATGGAAAATTATCAAGATAAAGAAGGAAAAATTCATATTCCTGATGTTTTGAAAA AATATTTTTAAAGAGTATAG
Downstream 100 bases:
>100_bases AAATGCTTAGAAATTTCTAAGCATTTTTAGTTAAGCTTGAAGATCTAGAGTTTTTCCGCCTAGTTCATCGATGCGATCGC TAACTTTTTTAAGTGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 820; Mature: 819
Protein sequence:
>820_residues MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASLPEELPQENSESGFKFTRESAPEDVSTFEEVESQEPT PWYKDRKFMSLVGLSLGIICILVFTLFYLTFSEGKIKPDIIASKTLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGE VEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAAVCALKLNDKEKFRYYIDLAQVY LPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDVEPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLY ARIGEYAKAKVALSTAMKIERDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDTYKIQVRLNKDLFNIAVA QNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDSTDAGIYLNISKAFSSTNVKIANIINYALNQK LRLANQEFQKLIKDYPEHSILHYNLALTYAQVQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDN IAADSNFKANMQKSMLFLVNNNYISMLPYLDEIKKDTPLSLIFEAIIAKNNNLNNQVDVKIAKLRSELPEDILANILYFN SLNSNLNIKEYAQNAQIHFKNLKLDYRSVFGGPNIAREFYVNLMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDI FAQQYEEAYALYNSLIDDYGAKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAISQ YKTLPNNFKSEFFTFDINNN
Sequences:
>Translated_820_residues MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASLPEELPQENSESGFKFTRESAPEDVSTFEEVESQEPT PWYKDRKFMSLVGLSLGIICILVFTLFYLTFSEGKIKPDIIASKTLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGE VEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAAVCALKLNDKEKFRYYIDLAQVY LPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDVEPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLY ARIGEYAKAKVALSTAMKIERDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDTYKIQVRLNKDLFNIAVA QNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDSTDAGIYLNISKAFSSTNVKIANIINYALNQK LRLANQEFQKLIKDYPEHSILHYNLALTYAQVQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDN IAADSNFKANMQKSMLFLVNNNYISMLPYLDEIKKDTPLSLIFEAIIAKNNNLNNQVDVKIAKLRSELPEDILANILYFN SLNSNLNIKEYAQNAQIHFKNLKLDYRSVFGGPNIAREFYVNLMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDI FAQQYEEAYALYNSLIDDYGAKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAISQ YKTLPNNFKSEFFTFDINNN >Mature_819_residues AEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASLPEELPQENSESGFKFTRESAPEDVSTFEEVESQEPTP WYKDRKFMSLVGLSLGIICILVFTLFYLTFSEGKIKPDIIASKTLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGEV EQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAAVCALKLNDKEKFRYYIDLAQVYL PKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDVEPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYA RIGEYAKAKVALSTAMKIERDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDTYKIQVRLNKDLFNIAVAQ NSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDSTDAGIYLNISKAFSSTNVKIANIINYALNQKL RLANQEFQKLIKDYPEHSILHYNLALTYAQVQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDNI AADSNFKANMQKSMLFLVNNNYISMLPYLDEIKKDTPLSLIFEAIIAKNNNLNNQVDVKIAKLRSELPEDILANILYFNS LNSNLNIKEYAQNAQIHFKNLKLDYRSVFGGPNIAREFYVNLMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDIF AQQYEEAYALYNSLIDDYGAKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAISQY KTLPNNFKSEFFTFDINNN
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93562; Mature: 93431
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASLPEELPQENSESGFKFT CCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCHHHCCCCCCCCCCEEC RESAPEDVSTFEEVESQEPTPWYKDRKFMSLVGLSLGIICILVFTLFYLTFSEGKIKPDI CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH IASKTLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGEVEQALKVYEQVAVYNESLSN HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCC YNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAAVCALKLNDKEKFRYYIDLAQVY CCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHEEHHHHH LPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDVEPYSDVAKYLSAKIYAKMDFDSKA CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCHHH IQQLNSQGNFESSLSLGLLYARIGEYAKAKVALSTAMKIERDFNQSLAALTLVDIKTGNY HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCH QDMLARLQNSYDNDKDRYKILDTYKIQVRLNKDLFNIAVAQNSFSKDLLKKQKDQFDLLF HHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCEEEEE YFAPYQVFDSKQAALYIKKANVTDFVDDSTDAGIYLNISKAFSSTNVKIANIINYALNQK EECCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHH LRLANQEFQKLIKDYPEHSILHYNLALTYAQVQNYELAYKHFSSSYHLNPKNYLAGAFAM HHHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHH FCAKLIDIDTTKLYNEILDNIAADSNFKANMQKSMLFLVNNNYISMLPYLDEIKKDTPLS HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEECCHHHHHCCCCCHH LIFEAIIAKNNNLNNQVDVKIAKLRSELPEDILANILYFNSLNSNLNIKEYAQNAQIHFK HHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEE NLKLDYRSVFGGPNIAREFYVNLMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDI EEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH FAQQYEEAYALYNSLIDDYGAKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKES HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEHEEHHHHCCCCCCHH KAALGMLYQEVKNYEAAISQYKTLPNNFKSEFFTFDINNN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC >Mature Secondary Structure AEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASLPEELPQENSESGFKFT CCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCHHHCCCCCCCCCCEEC RESAPEDVSTFEEVESQEPTPWYKDRKFMSLVGLSLGIICILVFTLFYLTFSEGKIKPDI CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH IASKTLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGEVEQALKVYEQVAVYNESLSN HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCC YNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAAVCALKLNDKEKFRYYIDLAQVY CCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHEEHHHHH LPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDVEPYSDVAKYLSAKIYAKMDFDSKA CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCHHH IQQLNSQGNFESSLSLGLLYARIGEYAKAKVALSTAMKIERDFNQSLAALTLVDIKTGNY HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCH QDMLARLQNSYDNDKDRYKILDTYKIQVRLNKDLFNIAVAQNSFSKDLLKKQKDQFDLLF HHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCEEEEE YFAPYQVFDSKQAALYIKKANVTDFVDDSTDAGIYLNISKAFSSTNVKIANIINYALNQK EECCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHH LRLANQEFQKLIKDYPEHSILHYNLALTYAQVQNYELAYKHFSSSYHLNPKNYLAGAFAM HHHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHH FCAKLIDIDTTKLYNEILDNIAADSNFKANMQKSMLFLVNNNYISMLPYLDEIKKDTPLS HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEECCHHHHHCCCCCHH LIFEAIIAKNNNLNNQVDVKIAKLRSELPEDILANILYFNSLNSNLNIKEYAQNAQIHFK HHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEE NLKLDYRSVFGGPNIAREFYVNLMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDI EEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH FAQQYEEAYALYNSLIDDYGAKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKES HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEHEEHHHHCCCCCCHH KAALGMLYQEVKNYEAAISQYKTLPNNFKSEFFTFDINNN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA