| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237430
Identifier: 57237430
GI number: 57237430
Start: 380300
End: 380776
Strand: Direct
Name: 57237430
Synonym: CJE0424
Alternate gene names: NA
Gene position: 380300-380776 (Clockwise)
Preceding gene: 57237429
Following gene: 57237431
Centisome position: 21.39
GC content: 23.48
Gene sequence:
>477_bases TTGAAGCATTGTTTAGCTCTGTGTTTTATTTTTTTTCTTTGTGCTTGTAGTGTGAAAAATCAAAATTTTTCGAGTCAAAG CTTGATGGTTTTGATTGCTTCTCCTATGATAAAAATCAATGACGCAGCTTTTTTAAAAAAAGAAAATAATGCTTTAAATT TAGAAGTTTATAAACTAGGGCAAGCTTTTTTTGAACTCAAAATCAAAGATAAAATTTGTATCAATGCAGTGTGTTATGAT AAAAAAGTGTTTAATCAAAAATTTTTTAAAAATGTATATTATGATGATATTTTAAGTGATATTTTAAAGGCAAATGCTTT ATGGCAGGGTAAAAATTTAGAAAAAACTGATTGTGGTTTTGAACAAAATTTAAAAGCAAAAAATTATGAAATTTTTTATC AAGTTTGTGATAATAAAGTAAGTTTTTTTGATAAAATTTCACATACTAAAATTATCTTAACGCATATTCAAAATTGA
Upstream 100 bases:
>100_bases TAGCAAAACAAATTGATGATTTACAAGCTGTGATGAAGCTTGTAAAAGAGCTTGATTTAGAGTTAAATATCAGTTTTAAA AATCTTAAATAAGGTCAAAT
Downstream 100 bases:
>100_bases AGGATAGAGTTTGAAATTTTTTTTACTGGTATTTTGCTTTGTAAATCTAGCTTTAGCGCAAGTTTATAAAGGTGAATTGT ATTTTTATCATTTGCAGGAT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAFLKKENNALNLEVYKLGQAFFELKIKDKICINAVCYD KKVFNQKFFKNVYYDDILSDILKANALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN
Sequences:
>Translated_158_residues MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAFLKKENNALNLEVYKLGQAFFELKIKDKICINAVCYD KKVFNQKFFKNVYYDDILSDILKANALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN >Mature_158_residues MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAFLKKENNALNLEVYKLGQAFFELKIKDKICINAVCYD KKVFNQKFFKNVYYDDILSDILKANALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18351; Mature: 18351
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAFLKKENNALNLEVYKLG CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCEEEEECCCEEEEEHEEHH QAFFELKIKDKICINAVCYDKKVFNQKFFKNVYYDDILSDILKANALWQGKNLEKTDCGF HHHEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCC EQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN CCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEEECC >Mature Secondary Structure MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAFLKKENNALNLEVYKLG CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCEEEEECCCEEEEEHEEHH QAFFELKIKDKICINAVCYDKKVFNQKFFKNVYYDDILSDILKANALWQGKNLEKTDCGF HHHEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCC EQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN CCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA