| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237431
Identifier: 57237431
GI number: 57237431
Start: 380787
End: 381611
Strand: Direct
Name: 57237431
Synonym: CJE0425
Alternate gene names: NA
Gene position: 380787-381611 (Clockwise)
Preceding gene: 57237430
Following gene: 57237432
Centisome position: 21.42
GC content: 25.94
Gene sequence:
>825_bases TTGAAATTTTTTTTACTGGTATTTTGCTTTGTAAATCTAGCTTTAGCGCAAGTTTATAAAGGTGAATTGTATTTTTATCA TTTGCAGGATAAAGAAATTTTTGCCATAGTTTATGATAATGCACCTATGACTCCACTTTTTGACAGGGATAAAAATCAAA CAAGTTCTAGTTTTTTAATTGTTGATGATATAAATGGAAATTTAGAGATTCCGCTCGTTAAGACAAATGATTTTTGGCAG GATGAGCGTAAAAAATATAAAATCAATTCTTCTAAAATGCTTACATATGATAATAAAAATTTTCAAGGAGAAAATTTAGG AACAACTACTTTAGAACTTGTCGAAACGCAAGATGGCATTCGTATAAAGCGTAGTCTTGATTTTATAGGTTTTAATGATG ATTTTAAAGAATTTCATCCTGTTCATAAGGGTGTATTTAGTTTTGAACAAATTCACCAAAAACCTATTTTTTTACAAGAT GGAAAAATTAGTTTTGAAGAATGGTATTATTTTTATGAAGATGGTATGAGTCGTGCTATTTTAGAGTTGAATAATTTTGT TTATGATATTAATGCTCACGCGTTTGTAAAACTAAATGATTTATATAATACTGAAAATCAAAAATTTCAAAATCTTTTAC ATGAGAAGCTTAAAAATACATGTGATGAGTGTTTTGAAGATCTGCAAAATTTACAATTTAATAATAATTTTTTGCTTAAT AATGGAAAACTAAAAATTTGTTATCTACCTTTTGAAGGTCATTTTTTAGATGAAAATATTTGCGTAGAATTTAATGAAGA TGAGCTTAAGGAATTTAAAAAATAA
Upstream 100 bases:
>100_bases GAAATTTTTTATCAAGTTTGTGATAATAAAGTAAGTTTTTTTGATAAAATTTCACATACTAAAATTATCTTAACGCATAT TCAAAATTGAAGGATAGAGT
Downstream 100 bases:
>100_bases TGGAAAAATTAAAAAATTTTTTAAGTTTGAAAAATATAGAAGATACTCAAATTTATAAAGAGCTTAAGTGTGCTAAAAAT GAGGCTTTGATTCTTAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMTPLFDRDKNQTSSSFLIVDDINGNLEIPLVKTNDFWQ DERKKYKINSSKMLTYDNKNFQGENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIHQKPIFLQD GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLKNTCDECFEDLQNLQFNNNFLLN NGKLKICYLPFEGHFLDENICVEFNEDELKEFKK
Sequences:
>Translated_274_residues MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMTPLFDRDKNQTSSSFLIVDDINGNLEIPLVKTNDFWQ DERKKYKINSSKMLTYDNKNFQGENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIHQKPIFLQD GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLKNTCDECFEDLQNLQFNNNFLLN NGKLKICYLPFEGHFLDENICVEFNEDELKEFKK >Mature_274_residues MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMTPLFDRDKNQTSSSFLIVDDINGNLEIPLVKTNDFWQ DERKKYKINSSKMLTYDNKNFQGENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIHQKPIFLQD GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLKNTCDECFEDLQNLQFNNNFLLN NGKLKICYLPFEGHFLDENICVEFNEDELKEFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32618; Mature: 32618
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMTPLFDRDKNQTSSSFLI CHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE VDDINGNLEIPLVKTNDFWQDERKKYKINSSKMLTYDNKNFQGENLGTTTLELVETQDGI EEECCCCEEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCE RIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIHQKPIFLQDGKISFEEWYYFYEDGMSRAI EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHEEEECCCHHHHH LELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLKNTCDECFEDLQNLQFNNNFLLN HHHCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NGKLKICYLPFEGHFLDENICVEFNEDELKEFKK CCEEEEEEEECCCCEECCCEEEEECHHHHHHHCC >Mature Secondary Structure MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMTPLFDRDKNQTSSSFLI CHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE VDDINGNLEIPLVKTNDFWQDERKKYKINSSKMLTYDNKNFQGENLGTTTLELVETQDGI EEECCCCEEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCE RIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIHQKPIFLQDGKISFEEWYYFYEDGMSRAI EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHEEEECCCHHHHH LELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLKNTCDECFEDLQNLQFNNNFLLN HHHCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NGKLKICYLPFEGHFLDENICVEFNEDELKEFKK CCEEEEEEEECCCCEECCCEEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA