| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237341
Identifier: 57237341
GI number: 57237341
Start: 300478
End: 301113
Strand: Reverse
Name: 57237341
Synonym: CJE0334
Alternate gene names: NA
Gene position: 301113-300478 (Counterclockwise)
Preceding gene: 57237342
Following gene: 57237340
Centisome position: 16.94
GC content: 25.16
Gene sequence:
>636_bases ATGGGTGATATTTTCGATTTGCTTATAGGCGAAATCTCTGCTACACATGAATTTGCTAAACCTTACATAGAACTTTTAGA AGAATTGGCCTTAAAAATTGAAATTATCTACTTAGAAGGCAATCATGATTTTAATCTTTCTTGTTTTTTTAAAAGGGTAA AAATTTTTAACTTACAAGAGCAGCCCATAAAGCTTAATTTGCATACAAGTAAAGGTAATAATCTTGTTTTAAATAATGCT TTTATAAAATTAGCTCACGGAGATATTTTTTTACCACCTCTTTTACAATTTACTCTGAAAACATTAAGAAATCATTATTT GCTTGTATTTTTGAATTTTTTAAATATTATTACTCGTAATTTTATTTCAAATAAAATTCTTCAAAATCAAAACAAAAAAA ACCTTTTTTATCAAATAAAAGATTTTGAAAATTTAGCGAAAAAAAGATATGAAAAATATGAAAATTTAGGATTTTGGGTA TGTGAAGGACACTATCATCAAAATCATCAAATCAACAAAGAAAACATTAAATATCTTAACTTAGCTAGTTTTGCATATAA GAGAAGTTTTTTTGTAGTAGAATATCAGCAAGAAATCAAATTTCGAGAACAGAAATTGAGGGGTCAAAATGTTTGA
Upstream 100 bases:
>100_bases TTTAATCGCAGATGCTCATGAAAATGAACAAAGAAAGGGATTTTGGGAATTTTTACAAGCCTTAAAAAAAGGTAAAATTT CCACCCCTCAACTCATACTT
Downstream 100 bases:
>100_bases TGAAAATATCGTGAAAACGGGTTCAAATGAAATGGAGCTTGTCGATTTCCGTATCTTTAAGCAAGGGCACGATAAAGTCT ATGAAGGAATTTATGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridine Nucleotide-Disulfide Oxidoreductase YkgC
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MGDIFDLLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFFKRVKIFNLQEQPIKLNLHTSKGNNLVLNNA FIKLAHGDIFLPPLLQFTLKTLRNHYLLVFLNFLNIITRNFISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWV CEGHYHQNHQINKENIKYLNLASFAYKRSFFVVEYQQEIKFREQKLRGQNV
Sequences:
>Translated_211_residues MGDIFDLLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFFKRVKIFNLQEQPIKLNLHTSKGNNLVLNNA FIKLAHGDIFLPPLLQFTLKTLRNHYLLVFLNFLNIITRNFISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWV CEGHYHQNHQINKENIKYLNLASFAYKRSFFVVEYQQEIKFREQKLRGQNV >Mature_210_residues GDIFDLLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFFKRVKIFNLQEQPIKLNLHTSKGNNLVLNNAF IKLAHGDIFLPPLLQFTLKTLRNHYLLVFLNFLNIITRNFISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWVC EGHYHQNHQINKENIKYLNLASFAYKRSFFVVEYQQEIKFREQKLRGQNV
Specific function: Unknown
COG id: COG2908
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25208; Mature: 25076
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIFDLLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFFKRVKIFNLQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHEEEHHHCCCCC QPIKLNLHTSKGNNLVLNNAFIKLAHGDIFLPPLLQFTLKTLRNHYLLVFLNFLNIITRN CCEEEEEEECCCCEEEEECEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWVCEGHYHQNHQINKENIKYLN HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEE LASFAYKRSFFVVEYQQEIKFREQKLRGQNV HHHHHHHHEEEEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure GDIFDLLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFFKRVKIFNLQE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHEEEHHHCCCCC QPIKLNLHTSKGNNLVLNNAFIKLAHGDIFLPPLLQFTLKTLRNHYLLVFLNFLNIITRN CCEEEEEEECCCCEEEEECEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWVCEGHYHQNHQINKENIKYLN HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEE LASFAYKRSFFVVEYQQEIKFREQKLRGQNV HHHHHHHHEEEEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA