Click here to switch to the map view.

The map label for this gene is rpmI

Identifier: 57237302

GI number: 57237302

Start: 261376

End: 261567

Strand: Direct

Name: rpmI

Synonym: CJE0294

Alternate gene names: 57237302

Gene position: 261376-261567 (Clockwise)

Preceding gene: 57237298

Following gene: 57237303

Centisome position: 14.7

GC content: 33.33

Gene sequence:

>192_bases
ATGCCAAAGATGAAAAGCGTTAAAAGCGCAGTTAAACGCTTCAAAGTAGGTAAAAATAAAATCAAAAGAGGCTCAGCTTT
TAGAAGTCATATTTTGACTAAAAAACCTGCAAAAAGAATGCGTGATCTTCGCACAGCTAAATATGTGCATAGCACAAATG
TAAAAGCTGTTGAAAAAATGCTAGGAATTTAA

Upstream 100 bases:

>100_bases
TTAAAAATTAAATTCAGTCAAAAATTAGAAAAAATTTGATAGTATTTATCTTTTCTTTTAAAGTTTGAAAAATAAAAATT
TATCTAAATAAGGAAAGCGT

Downstream 100 bases:

>100_bases
GTTTTTGACTAAAAGTCATTCAAACTCCCCTCTGAGATAAAATTTCAAGGGCAAGCTCCAAATTTGGACGCCACTTTATG
AAAGGAAATAAAAATGGCAA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNVKAVEKMLGI

Sequences:

>Translated_63_residues
MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNVKAVEKMLGI
>Mature_62_residues
PKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNVKAVEKMLGI

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_CAMJ8 (A8FK33)

Other databases:

- EMBL:   CP000814
- RefSeq:   YP_001481797.1
- ProteinModelPortal:   A8FK33
- SMR:   A8FK33
- STRING:   A8FK33
- GeneID:   5618182
- GenomeReviews:   CP000814_GR
- KEGG:   cju:C8J_0221
- eggNOG:   COG0291
- HOGENOM:   HBG734125
- OMA:   AKRFKVG
- ProtClustDB:   PRK00172
- BioCyc:   CJEJ407148:C8J_0221-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7212; Mature: 7081

Theoretical pI: Translated: 12.33; Mature: 12.33

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNVKAVEKM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHH
LGI
HCC
>Mature Secondary Structure 
PKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNVKAVEKM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHH
LGI
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA