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The map label for this gene is ynaI [C]

Identifier: 57237298

GI number: 57237298

Start: 255271

End: 257154

Strand: Direct

Name: ynaI [C]

Synonym: CJE0289

Alternate gene names: 57237298

Gene position: 255271-257154 (Clockwise)

Preceding gene: 57237297

Following gene: 57237302

Centisome position: 14.36

GC content: 27.76

Gene sequence:

>1884_bases
ATGAAGAAAATTATTTTTAGTTTATGTTTTTTTATTTTATACCTTGGAGCACAAGAATTTAAATTTATTGATGCGAATAT
TAGTAAAGAGGATGAAGGAATTTATGCTTTAGTTGAAAAATATGTTGATCTTAACAATCAAATTAAAGAATTTAAGAAAA
ACAATGATGAAAATTCAAGCACTTTTAATGGTATTTTAAGTGAATTTGAAAAAGACAAAAAGACTATTTTAGCAAAAATA
CCCGATATGATAGTAGGACAAAAGATTAATGAAGAGGCAGTGGCTAGATTTTTAAAAGCAAAAGAAAAATTACTAGATGT
TCAAAAAAAGAATATTAATAAGCCTTATATTTATACAGATGCCACTCTTAATCTAGTTTATTTTAATATTGTGGAAAGTT
TTTATTCTTCTTTGTTTGAAGTGGAAAAACTTTTTAAAAATACAGCAAGCAGTGAAGATTTGATTGCTACTGTTGATAAG
GCAATGGAAAATTTACAAAATTCTTCTAATGTTAATTTAGATAGTTTTAAAAGCAAAATTACAAATTCAGAAGAATTAGA
AAAAATTACCCTAAAAGAAAGATATATCAGTAATGCTGTAGATTCTTATTCTGAAATTCTTAAGTATTTACGCTCAAATG
CAGATTTGCTTGAAAGTAATTATATTTTTTCATTACTCGAGCTTCAAGTTTGGATAGATCGTATAAATGAGGCAATTGGG
GTAAGTTTTGTTAATATCGGAAAAATAGTAATTTCTGCTTTGGTTTTAGTATTTTTTATATCTTTAAGACGTTTTTTTGC
AAATATAGTATATTTTTTCCTTGTTCAGTTTTTTTATAGAAATAAAAATGATGTAGATGATATTAAAGTCATTTTTATTG
AGAATATTAAAAAACCCGTAGGCTTCTTGTTGATTGTCTATGCTATTTCTCTTTGTCTTACTATAGCAACTTATCCTGCA
CCTTTGAGTGTAAATTTAAGTAATTTTTTTCATATAGTTTATGCAGTTTTAATTGCATGGCTTATTTTAAGAATGCTTGA
TGGTTATGGCGTGGTATTGGTTTCTAAACTTGCTCAAAAAAGTGGAAAAAAAGAAGTTGTAAATTTAATTATTAAAATTT
TATATTTTGTCATTATTATTATAGCTTTATTATATATTCTTGCTCAACTTGGTTTTAATATTTCGGCTATTATTGCATCT
TTGGGAATTGGTGGTTTAGCTGTTGCTTTAGCGGCGAAAGATATCATTGCAAATTTCTTTGCTTCTATACTCTTACTTTT
TGATAATAGCTTTAATCAAGGAGATTGGGTAGAGGTTTCAGGCATAGAAGGAACCGTGGTTGAAACAGGACTTAGAAAAA
CTACTATTAGAACTTTTGATAATTGTCTTGTATTTTTACCAAATTCAACTATTATGGGAGCTAATATCAAAAATTGGAGC
AAAAGACGCATGGGTCGCCATGTTAGAATGTATTTGGGTGTTGGTTATGATGCTACTCCTGAAAAACTAGAACAATGTGT
AAAAGATCTAAGAGAATTTTTGCATACAAGTGATTTAGTAGCTCACGATGAGGATAGCGCATTAAAATATGGCGATCATA
CAACAAAATATCGTCAAAATCTTGTATCTATTAATGATTTAGAAGGCTATAAAAATGCTTGTTATGTGGCTTTAAGTGAA
TTTGCAGATAGTAGTATTAATATAGAGCTTTATTTTTATATCAAAGAAATAGGTGGAAAAGATTTTAGAGAAGCTAGACA
AAGTTTAATGCTTGAGTTTATGCGTATAATTGAAAAAAATGGTTTAACCTTTGCTTTCCCAAGTCGTAGTATTTATATAG
AAAATTTACCACCCCTTGATTTGCAAGCAAAAGCTATAAAATAG

Upstream 100 bases:

>100_bases
TAGAAGTACATGCTTGGTATTATATTATAGAGACAGGTGAAATTTATGAGTATGATTTTAAAGCAAAAATTTTTACTTTA
ATACAGGATAGGAAAGTTCA

Downstream 100 bases:

>100_bases
CAAGATTTTATCTTGCTATTTTTTAAACCGGCATAACGCGTATATTTGGACTTAATTCTTCTTGTAAAATTGTTTCAATA
GCATAAAGTGTTGCACCACT

Product: mechanosensitive ion channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKI
PDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
AMENLQNSSNVNLDSFKSKITNSEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
VSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQFFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPA
PLSVNLSNFFHIVYAVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIAS
LGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSE
FADSSINIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAKAIK

Sequences:

>Translated_627_residues
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKI
PDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
AMENLQNSSNVNLDSFKSKITNSEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
VSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQFFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPA
PLSVNLSNFFHIVYAVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIAS
LGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSE
FADSSINIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAKAIK
>Mature_627_residues
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKI
PDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
AMENLQNSSNVNLDSFKSKITNSEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
VSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQFFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPA
PLSVNLSNFFHIVYAVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIAS
LGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSE
FADSSINIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAKAIK

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=256, Percent_Identity=33.203125, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1789291, Length=242, Percent_Identity=25.2066115702479, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786670, Length=189, Percent_Identity=27.5132275132275, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 71422; Mature: 71422

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSS
CHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCH
TFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
ATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDKAMENLQNSSNVNLDSFKSKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC
TNSEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQFFYRNKNDVDDIKVIFIENIKKPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHH
GFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVYAVLIAWLILRMLDGYGVVLVSKLAQK
HHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIASLGIGGLAVALAAKDIIANFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
ASILLLFDNSFNQGDWVEVSGIEGTVVETGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
HHHHHHHCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHCCEEEECCCCEEECCCCCHHH
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQN
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LVSINDLEGYKNACYVALSEFADSSINIELYFYIKEIGGKDFREARQSLMLEFMRIIEKN
CCCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHC
GLTFAFPSRSIYIENLPPLDLQAKAIK
CCEEEECCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSS
CHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCH
TFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
ATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDKAMENLQNSSNVNLDSFKSKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC
TNSEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQFFYRNKNDVDDIKVIFIENIKKPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHH
GFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVYAVLIAWLILRMLDGYGVVLVSKLAQK
HHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIASLGIGGLAVALAAKDIIANFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
ASILLLFDNSFNQGDWVEVSGIEGTVVETGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
HHHHHHHCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHCCEEEECCCCEEECCCCCHHH
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQN
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LVSINDLEGYKNACYVALSEFADSSINIELYFYIKEIGGKDFREARQSLMLEFMRIIEKN
CCCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHC
GLTFAFPSRSIYIENLPPLDLQAKAIK
CCEEEECCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]