| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237260
Identifier: 57237260
GI number: 57237260
Start: 228698
End: 230068
Strand: Direct
Name: 57237260
Synonym: CJE0250
Alternate gene names: NA
Gene position: 228698-230068 (Clockwise)
Preceding gene: 57237259
Following gene: 57237261
Centisome position: 12.86
GC content: 29.76
Gene sequence:
>1371_bases ATGAAAAAAGAAATCAAATCCAAAAGAGAAGTGATATTAAAAAACAATAGTCTTATAAACACTCTTATAAACTCAAGCTA TTTAAATGTGCTTAAAATCAGCGAGAACGATCAAAAAATGATTTTTAAAGATCTAAGCTTTACTCAAGCTCATCAATCAC GAAGGAGTGTGATTTTAGCAAAAGAGCTTCAAATCGTTTGTGAAAACGAAAAAATAAAAGAAAGCTTTGAGTATCTTTTC AATCCTGATTTATTAAGTCAAATCTTAGAAACCTATCTTTATGGGCTTAATGTATTTGAAGTTAATTACAAGTTAAAAGA TGGTTTTTACTATCCAATCTTAAAACAAAGAGATTTTAGAAATTTTGGCTTTAATGAAAATGATGAGTTAGTTTATAATA GCAATGGTTGCGAAGAAATTGTGGAAGATAAAAAAGCAATTTATGGACTTTTTGGCTCTAATTTTTTATTTAAAAATGGC GATGCCTTATTAACAAAGCTTTATTTTCCAGTAAAGCTTAAAAATGCAAGTTTAAAGTTTTGGATGGAGTTTTTAGAAAG ATTTGGTTCTCCTTGGGCAGTTGCAAAAACAGATAGCGATCCTGATGCACTAGCTTCTGAAATTCATCAAATGTTAAATG GCGATAGTGCGGTCATTGATAAAGAAGAAGAGCTTGATTTAATCCAGCCAAAGGCTAAGGCAAATTATAATGAAATAATA GATTACTTAGATAATCAAATAAGAAGCGTGGTTTTAGGAGCTAATTTAAGTTCTCAAGTAAGCGGAGGTTCTTTAGCAGC GGCTGAATCACATAATCAAATAAGAAAAGATTTAGCCGCCCAAGATGGACAAATCGTTCTTTTTATTTTAAATCGTGCCA TTAAGTTTTTCAAAGAAATCAATCATTTTAAAGATGAACTCTATGTGCAGTTTTTTAGCGAAGCAGAACCAAAAAGTGAG CTTTGCGAAAGGGACTTAAAACTTTTTAACATGGGCTTTTGCTTTGATGAAGAATACATTAAAAACACTTATAATGTAGA GGGTGAGCTTATAAGAGAGACTTTAGAAAAAAAAGACTTTAAAGATTTAGAAAATGATAAAAAAGTCTTTGAAAACAAAG TAAAGTTAGAGAGCTTTGAAGAAGATTTTATTGACAAAGGATTAGAACAAAAAGAATACTTAAAAGTCGATGAGAGCATG TCAAAGTTTTTTCAAGAGCAATTTGAAAGCATTGTAAAAGATTGTAAAGATTTTAACGAGGCACTCAATAAACTTAAAGA AAATTTTTCTAGTTTAGAGCAAAGCGAGTTTGAAAAACATCTTTTTATAGCTTTAAATAATTCCAGTATTTTAGGATACT TGGAGGATTAA
Upstream 100 bases:
>100_bases AGCAGGAGCATTTTTATTAGCAAGAACTAAAAGTAGCATTAAAAGAAGAAAGCATCATTTTAACTCTGTTTCAAGAATAA GGCGTTTTTAAAGGAAAAAT
Downstream 100 bases:
>100_bases AATGACAGGTGCAAAAATAGGATTTTTTTCAGAACCTACTAAAGCTGTTGATTTTTTAAAAAATAAAAAGCCAGAGCTTA GTTTTGATTATGATGAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQKMIFKDLSFTQAHQSRRSVILAKELQIVCENEKIKESFEYLF NPDLLSQILETYLYGLNVFEVNYKLKDGFYYPILKQRDFRNFGFNENDELVYNSNGCEEIVEDKKAIYGLFGSNFLFKNG DALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKAKANYNEII DYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAIKFFKEINHFKDELYVQFFSEAEPKSE LCERDLKLFNMGFCFDEEYIKNTYNVEGELIRETLEKKDFKDLENDKKVFENKVKLESFEEDFIDKGLEQKEYLKVDESM SKFFQEQFESIVKDCKDFNEALNKLKENFSSLEQSEFEKHLFIALNNSSILGYLED
Sequences:
>Translated_456_residues MKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQKMIFKDLSFTQAHQSRRSVILAKELQIVCENEKIKESFEYLF NPDLLSQILETYLYGLNVFEVNYKLKDGFYYPILKQRDFRNFGFNENDELVYNSNGCEEIVEDKKAIYGLFGSNFLFKNG DALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKAKANYNEII DYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAIKFFKEINHFKDELYVQFFSEAEPKSE LCERDLKLFNMGFCFDEEYIKNTYNVEGELIRETLEKKDFKDLENDKKVFENKVKLESFEEDFIDKGLEQKEYLKVDESM SKFFQEQFESIVKDCKDFNEALNKLKENFSSLEQSEFEKHLFIALNNSSILGYLED >Mature_456_residues MKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQKMIFKDLSFTQAHQSRRSVILAKELQIVCENEKIKESFEYLF NPDLLSQILETYLYGLNVFEVNYKLKDGFYYPILKQRDFRNFGFNENDELVYNSNGCEEIVEDKKAIYGLFGSNFLFKNG DALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKAKANYNEII DYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAIKFFKEINHFKDELYVQFFSEAEPKSE LCERDLKLFNMGFCFDEEYIKNTYNVEGELIRETLEKKDFKDLENDKKVFENKVKLESFEEDFIDKGLEQKEYLKVDESM SKFFQEQFESIVKDCKDFNEALNKLKENFSSLEQSEFEKHLFIALNNSSILGYLED
Specific function: Unknown
COG id: COG4383
COG function: function code S; Mu-like prophage protein gp29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53130; Mature: 53130
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQKMIFKDLSFTQAHQSRRSVILA CCCHHHHHHHEEECCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH KELQIVCENEKIKESFEYLFNPDLLSQILETYLYGLNVFEVNYKLKDGFYYPILKQRDFR HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEECCCCCCCCC NFGFNENDELVYNSNGCEEIVEDKKAIYGLFGSNFLFKNGDALLTKLYFPVKLKNASLKF CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEHHEECCEEECCCHHHH WMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKAKANYNEII HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCHHCCCCCCCHHCCCHHHHH DYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAIKFFKEI HHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH NHFKDELYVQFFSEAEPKSELCERDLKLFNMGFCFDEEYIKNTYNVEGELIRETLEKKDF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH KDLENDKKVFENKVKLESFEEDFIDKGLEQKEYLKVDESMSKFFQEQFESIVKDCKDFNE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALNKLKENFSSLEQSEFEKHLFIALNNSSILGYLED HHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEECC >Mature Secondary Structure MKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQKMIFKDLSFTQAHQSRRSVILA CCCHHHHHHHEEECCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH KELQIVCENEKIKESFEYLFNPDLLSQILETYLYGLNVFEVNYKLKDGFYYPILKQRDFR HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEECCCCCCCCC NFGFNENDELVYNSNGCEEIVEDKKAIYGLFGSNFLFKNGDALLTKLYFPVKLKNASLKF CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEHHEECCEEECCCHHHH WMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKAKANYNEII HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCHHCCCCCCCHHCCCHHHHH DYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAIKFFKEI HHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH NHFKDELYVQFFSEAEPKSELCERDLKLFNMGFCFDEEYIKNTYNVEGELIRETLEKKDF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH KDLENDKKVFENKVKLESFEEDFIDKGLEQKEYLKVDESMSKFFQEQFESIVKDCKDFNE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALNKLKENFSSLEQSEFEKHLFIALNNSSILGYLED HHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA