| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237261
Identifier: 57237261
GI number: 57237261
Start: 230070
End: 231308
Strand: Direct
Name: 57237261
Synonym: CJE0251
Alternate gene names: NA
Gene position: 230070-231308 (Clockwise)
Preceding gene: 57237260
Following gene: 57237262
Centisome position: 12.94
GC content: 30.02
Gene sequence:
>1239_bases ATGACAGGTGCAAAAATAGGATTTTTTTCAGAACCTACTAAAGCTGTTGATTTTTTAAAAAATAAAAAGCCAGAGCTTAG TTTTGATTATGATGAACTTTCATATTCAACCCATAAAAAAGTCTTTACTATTGCTAAGCTTATGGATGAAAGCTTGTTAA AAGATATGCAAGATACTTTAGTAAATGCTATTAAAAATGGGGATAAATTTAGCACTTGGAGTAAGATTGCAGAGGAGAAA TTAAAAGCTAAAGGTTGGTGGGGTTCAAAGGAAGTTATAAACCCTAAAACAGGTGAAGTTAAAAAAACTCATTTTAATAG TGCAAGATTAAAAAAAATCTTTGAGGAAAACTCAAGAAAAGCTAAAGCTAAAGCTATCTATGAAAATCAAATGAAAAGCA CTAAACCTTATTTTAAATACTGCACCCAAAAAGATTCTTTGGTTAGGGACAAACACAGAGCCTTTGATGGCATAGTTTTA CATAAAGATGATCCTTTTTGGGATAGTCATTATCCGCATGTAACTATGCATGATTATGGTTGCAGGTGTTATGTTTTAGA AGTAGGTGAAAGTGAAGTTAAAGGCCTAAAAATACCACCATCAAATGCCAAAGAAAGCGAATTTAATGGCTTTAATGATG AAGAGCTTTTAGATGAGCTTTATAAACAAAAAAACACTGAAGTCATTCAAAACTTTATAAAACTTGATATGTTAAGTGCA GCGGCTAAAAAAACAAAAGAAGTTAAAAGCTTCACTCATCAAAAAGAACTGTACACTTGGCAAAAAAGCTTAGATGATAT GGTGGATGAAGTCATCATTAAAGATAATCAAAAATATCCTATCAATTTCATACAAGTAGGTAAAATGGATAAAAGCACCA AAGAGTTTTTAGAAAAACTTAATAAAAAAGACTTAGAAGACTTATACTTTACACTGAGCAAAAACAATCTTTTACACGCA AGTCCTAAAAGAAAGGCAAGTTATAATCAGGCTTTAAGCGCGGATGAAATCAAGCAAATTGTTAAAGTTTTAGATGAAGC AAAAGAAGTTTATTGGGATAATGCAAATAATTCTTTATTGTATTTCTTTGAAGATAAAAAAGATGCTAGTCGTATCAATA AAATTGTAATTACCCCTGATTATAAGCTAAAGAAGTTTGGTAAAACCAATGCAATAGTTACATTAGGAAAAGTAGAAGCG ATTAATAAAGATAATAAGACATATATTAAGATCAGATAA
Upstream 100 bases:
>100_bases CTTAAAGAAAATTTTTCTAGTTTAGAGCAAAGCGAGTTTGAAAAACATCTTTTTATAGCTTTAAATAATTCCAGTATTTT AGGATACTTGGAGGATTAAA
Downstream 100 bases:
>100_bases GGCGGTGAGACTTGCACTCACAATACATACCCCAATTAATTTGGACTATCCTACTACTACATTTTAGGTATCAACCTTAT CTAATTAAGATAATTTTAGC
Product: prophage MuSo1, F protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTIAKLMDESLLKDMQDTLVNAIKNGDKFSTWSKIAEEK LKAKGWWGSKEVINPKTGEVKKTHFNSARLKKIFEENSRKAKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVL HKDDPFWDSHYPHVTMHDYGCRCYVLEVGESEVKGLKIPPSNAKESEFNGFNDEELLDELYKQKNTEVIQNFIKLDMLSA AAKKTKEVKSFTHQKELYTWQKSLDDMVDEVIIKDNQKYPINFIQVGKMDKSTKEFLEKLNKKDLEDLYFTLSKNNLLHA SPKRKASYNQALSADEIKQIVKVLDEAKEVYWDNANNSLLYFFEDKKDASRINKIVITPDYKLKKFGKTNAIVTLGKVEA INKDNKTYIKIR
Sequences:
>Translated_412_residues MTGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTIAKLMDESLLKDMQDTLVNAIKNGDKFSTWSKIAEEK LKAKGWWGSKEVINPKTGEVKKTHFNSARLKKIFEENSRKAKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVL HKDDPFWDSHYPHVTMHDYGCRCYVLEVGESEVKGLKIPPSNAKESEFNGFNDEELLDELYKQKNTEVIQNFIKLDMLSA AAKKTKEVKSFTHQKELYTWQKSLDDMVDEVIIKDNQKYPINFIQVGKMDKSTKEFLEKLNKKDLEDLYFTLSKNNLLHA SPKRKASYNQALSADEIKQIVKVLDEAKEVYWDNANNSLLYFFEDKKDASRINKIVITPDYKLKKFGKTNAIVTLGKVEA INKDNKTYIKIR >Mature_411_residues TGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTIAKLMDESLLKDMQDTLVNAIKNGDKFSTWSKIAEEKL KAKGWWGSKEVINPKTGEVKKTHFNSARLKKIFEENSRKAKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVLH KDDPFWDSHYPHVTMHDYGCRCYVLEVGESEVKGLKIPPSNAKESEFNGFNDEELLDELYKQKNTEVIQNFIKLDMLSAA AKKTKEVKSFTHQKELYTWQKSLDDMVDEVIIKDNQKYPINFIQVGKMDKSTKEFLEKLNKKDLEDLYFTLSKNNLLHAS PKRKASYNQALSADEIKQIVKVLDEAKEVYWDNANNSLLYFFEDKKDASRINKIVITPDYKLKKFGKTNAIVTLGKVEAI NKDNKTYIKIR
Specific function: Involved in virion morphogenesis [H]
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein F [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006528 [H]
Pfam domain/function: PF04233 Phage_Mu_F [H]
EC number: NA
Molecular weight: Translated: 47854; Mature: 47723
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTIAKLMDESLLKDMQDTL CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH VNAIKNGDKFSTWSKIAEEKLKAKGWWGSKEVINPKTGEVKKTHFNSARLKKIFEENSRK HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCHH AKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVLHKDDPFWDSHYPHVTMHDYG HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCC CRCYVLEVGESEVKGLKIPPSNAKESEFNGFNDEELLDELYKQKNTEVIQNFIKLDMLSA CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAKKTKEVKSFTHQKELYTWQKSLDDMVDEVIIKDNQKYPINFIQVGKMDKSTKEFLEKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHH NKKDLEDLYFTLSKNNLLHASPKRKASYNQALSADEIKQIVKVLDEAKEVYWDNANNSLL CCCCHHHHHEEECCCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE YFFEDKKDASRINKIVITPDYKLKKFGKTNAIVTLGKVEAINKDNKTYIKIR EEEECCCCHHHCCEEEECCCHHHHHCCCCCEEEEECCEEEECCCCCEEEEEC >Mature Secondary Structure TGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTIAKLMDESLLKDMQDTL CCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH VNAIKNGDKFSTWSKIAEEKLKAKGWWGSKEVINPKTGEVKKTHFNSARLKKIFEENSRK HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCHH AKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVLHKDDPFWDSHYPHVTMHDYG HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCC CRCYVLEVGESEVKGLKIPPSNAKESEFNGFNDEELLDELYKQKNTEVIQNFIKLDMLSA CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAKKTKEVKSFTHQKELYTWQKSLDDMVDEVIIKDNQKYPINFIQVGKMDKSTKEFLEKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHH NKKDLEDLYFTLSKNNLLHASPKRKASYNQALSADEIKQIVKVLDEAKEVYWDNANNSLL CCCCHHHHHEEECCCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE YFFEDKKDASRINKIVITPDYKLKKFGKTNAIVTLGKVEAINKDNKTYIKIR EEEECCCCHHHCCEEEECCCHHHHHCCCCCEEEEECCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]