| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is thrS [H]
Identifier: 57237210
GI number: 57237210
Start: 200275
End: 202083
Strand: Direct
Name: thrS [H]
Synonym: CJE0199
Alternate gene names: 57237210
Gene position: 200275-202083 (Clockwise)
Preceding gene: 57237209
Following gene: 57237211
Centisome position: 11.27
GC content: 33.94
Gene sequence:
>1809_bases ATGGAAAAAGAAGTTATTGCGTATTTGGACAATGAGACGATAATTGACTCTCAAAGTGTGAAAAATACAAATTTAAAAGA AATTTATTTTGATAATTCTAAAGAAAGTTTAGAAGTGATACGCCATTCTTGTGCGCATTTGATGGCACAGGCGATTAAGA GCTTGTATCCTGAGGCTAAATTTTTCGTTGGTCCTGTTATAGAAGATGGATTTTATTATGATTTTCGTGTAGAAAGTAAG ATTGGTGAAGAAGATTTAGTAAAAATTGAAAAAAAGATGAAAGAACTTGCTGAAGCAAAGATTGAAATTTCAAAATATGA AATCACAAAAAACGAAGCTTTGGCTAAATTTCAAAATGATGATTTAAAACAAGAAGTTTTATTGCGTATTCCTGATGGAG CTGTAAGTATTTATAAACAAGGTGAATTTGAAGATTTGTGTCGTGGTCCTCATGTGCCAAATACGAAATTTTTACGCTTT TTTAAACTCACTCGTGTTGCAGGAGCGTATTTGGATGGCGATGAAAAAAGAGAAATGCTTACTCGAATTTATGGGACTGC TTTTGCAGATAAGGAAAGTTTAAAAGAGTATTTAACCATTATTGAAGAAGCTAAAAAACGCGATCATAGAAAGCTTGGAA CAGAGCTTAAACTTTTTACTTTTGATGATGAGATCGGAGGAGGCCTTCCTATCTGGTTAAGTAATGGTGCAAGACTTAGA TCTAAACTTGAACATATGCTTTATAAAATTCATCGTTTGCGTGGTTATGAGCCTGTGCGTGGGCCTGAGCTTTTAAAAGC AGATGCATGGAAAATCAGTGGGCATTATGCAAACTATAAAGAAAATATGTATTTTACACAAATTGATGAACAAGAGTATG GTATTAAGCCTATGAACTGTGTGGGGCATATTAAAATTTATCAAAGTGATGTAAGAAGCTATCGTGATTTGCCTTTGAAA TTTTTTGAATACGGCGTAGTGCATCGTCATGAAAAAAGTGGGGTTTTGCACGGACTTTTTAGAGTGAGAGAATTCACTCA AGATGATGCACATATTTTTTGTATGCCAAGTCAGATTAAAGAGCAGGTTTTAGAAATTTTAGCTTTTGTGGATAATTTGA TGAAATTATTTGATTTTAGCTATGAAATGGAAATTTCAACTAAACCTGAAAAAGCCATAGGTGATGATGAAATTTGGGAA GTGGCGACTAAGGCTTTAAAAGAAGCTTTAGATGAACAAGGTTTAAAATACGGCATCGATGAAGGTGGCGGGGCTTTTTA TGGGCCAAAGATTGATATTAAAATCACTGATGCTTTAAAAAGAAAGTGGCAATGTGGAACTATACAAGTAGATTTTAACC TGCCAAGTCGTTTTAAACTTGAATACACTGATAGTGATAATGAAAAAAAACAACCTGTAATGTTGCATCGTGCGATTTTA GGTTCTTTTGAAAGATTTATAGGAATTTTAACCGAGCATTGTGCGGGTGAGTTTCCATTTTTTATCGCACCAACTGCGGT GGGTATAGTGCCAATAGGCGAAGCACATATTGCTTACGCAAAAGAAATTCAAAAAGAATTATTAGAGCTTAATATCGATA GCGAGGTGTATGAAAAAAATGAGAGCTTAAGTAAAAAAATTCGTATCGCTGAAAAGCAAAAATTACCTATGATTTTAGTT TTAGGCGATGATGAGGTGGCAAAGCGTAGCGTTGCTTTAAGAGATAGAAGAGCTAAAGAACAAAAAAATCTTAGCTTGGA CGAATTTATTAAATTAGTTAAGGAGAAAATGAGTGAGGTACACTTTTGA
Upstream 100 bases:
>100_bases TAAAAATAAGCTGAATTTCAAAAATAATTAAGTCTTAGAAAGTTAAAATTAGAACTTTATAAACACTCACAGGGTAAGTG AGCGACAAAGGGTTAAAAAT
Downstream 100 bases:
>100_bases GTAAAGAAAAAGAAGTATTGCTCAATGAAGAAATAAGAGCGGATGAAATCAGATGTGTTGGCGATGATGGCAAAGTTTAT GGTATTATCAGTAGTGATGA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESK IGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF FKLTRVAGAYLDGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNGARLR SKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLK FFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKAIGDDEIWE VATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAIL GSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILV LGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF
Sequences:
>Translated_602_residues MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESK IGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF FKLTRVAGAYLDGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNGARLR SKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLK FFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKAIGDDEIWE VATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAIL GSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILV LGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF >Mature_602_residues MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESK IGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF FKLTRVAGAYLDGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNGARLR SKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLK FFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKAIGDDEIWE VATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAIL GSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILV LGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=596, Percent_Identity=37.751677852349, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI38570111, Length=583, Percent_Identity=37.7358490566038, Blast_Score=414, Evalue=1e-115, Organism=Homo sapiens, GI20070344, Length=595, Percent_Identity=33.4453781512605, Blast_Score=351, Evalue=1e-96, Organism=Escherichia coli, GI1788013, Length=603, Percent_Identity=42.7860696517413, Blast_Score=504, Evalue=1e-144, Organism=Caenorhabditis elegans, GI71984184, Length=595, Percent_Identity=38.3193277310924, Blast_Score=428, Evalue=1e-120, Organism=Caenorhabditis elegans, GI71984192, Length=595, Percent_Identity=38.3193277310924, Blast_Score=428, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6322112, Length=582, Percent_Identity=39.0034364261168, Blast_Score=445, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322654, Length=387, Percent_Identity=36.4341085271318, Blast_Score=271, Evalue=3e-73, Organism=Drosophila melanogaster, GI24583839, Length=572, Percent_Identity=41.0839160839161, Blast_Score=450, Evalue=1e-126, Organism=Drosophila melanogaster, GI24583842, Length=572, Percent_Identity=41.0839160839161, Blast_Score=450, Evalue=1e-126, Organism=Drosophila melanogaster, GI28574141, Length=572, Percent_Identity=41.0839160839161, Blast_Score=450, Evalue=1e-126,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 69587; Mature: 69587
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK CCCCEEEEECCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQND EEECCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEHHEEEECHHHHHHHHCCC DLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRFFKLTRVAGAYLDGDEKREML CHHHHHHEECCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH TRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNGARLR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHH SKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQIDEQEYGIKPMNC HHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCCCCCCCEEEEEECCHHCCCCCCCH VGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIK HEEEEEEHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHH EQVLEILAFVDNLMKLFDFSYEMEISTKPEKAIGDDEIWEVATKALKEALDEQGLKYGID HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCC EGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAIL CCCCEEECCEEEEEEEHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHH GSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKN HHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCC ESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC HF CC >Mature Secondary Structure MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK CCCCEEEEECCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQND EEECCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEHHEEEECHHHHHHHHCCC DLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRFFKLTRVAGAYLDGDEKREML CHHHHHHEECCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH TRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNGARLR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHH SKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQIDEQEYGIKPMNC HHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCCCCCCCEEEEEECCHHCCCCCCCH VGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIK HEEEEEEHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHH EQVLEILAFVDNLMKLFDFSYEMEISTKPEKAIGDDEIWEVATKALKEALDEQGLKYGID HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCC EGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAIL CCCCEEECCEEEEEEEHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHH GSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKN HHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCC ESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC HF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA