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The map label for this gene is rsmI [H]

Identifier: 57237162

GI number: 57237162

Start: 156074

End: 156898

Strand: Reverse

Name: rsmI [H]

Synonym: CJE0150

Alternate gene names: 57237162

Gene position: 156898-156074 (Counterclockwise)

Preceding gene: 57237163

Following gene: 57237161

Centisome position: 8.83

GC content: 28.73

Gene sequence:

>825_bases
ATGCTTTATTTTATTCCTACTCCCATAGGAAATTTAAGCGATATTTCTTTTAGAGCCTTAGAACTTTTAAAGACTTGCGA
TCTTGTGTTTTGCGAAGATACAAGAGTAAGTAAGTCTTTGATTTCGTTATTAAATACCAAATTTCACACTGATATACATA
TTTCTAAATTTATAGCCTTACACTCCCATAATGAAAAAGAAGTTTTAGCAAGTATTGATTTAAAGATATTTGAAAAAAAT
GTAGCTTATTTAAGCGATGCAGGAATGCCAGGGATTAGTGATCCTGGCAAGGCTTTGGTAGAATTTGCACAAGAAAATAA
TATCACCTATGAAATTTTACCAGGTGCAAATGCAGCCTTAGTTGCTCTTGTAAGCTCAGCATTTTGTCAAAAAGAATTTA
TCTTTATTGGTTTTTTAGCAAATAAAGGCAAAGAAAGACAAAAAGATATAGAAAAAATTTTAAACTTTCCTTATCCAAGT
ATTATTTACGAATCCCCCAAGCGTATTTTATCTTTAGTAGAACAGATTATGATTCTAGACAGCCAAAGAGAAATTTTTTT
GATTAAAGAAATCAGTAAAAAATTTGAAAAAAAATTTAAAGGCAATGCTAAAGAGCTTTCTGAAATTTTAAAAAAGTCTA
ATTTAAACGGTGAATGGGTTGTAGTACTGCAATCAAAAGAGCAAAATTTTTTGCAAAATACTCTTTGTGAAAAAGATATT
ATGGATTTAGAGCTGTCTTTAAAAGCAAAAGCAAAATTATTATCAAAGATCAATGGAAAAAATGCAAAAGAAATTTATCA
AAAACTGCTTTTAAGTCAAGATTAG

Upstream 100 bases:

>100_bases
TTTGTTCAAATTGCCATCCTTTTTTTACAGGCAGTGAAAAAATTGTAGATGCTGCAGGTCGTGTAGAGAAATTTAAGAAA
AAATACGCAATGCAATAATT

Downstream 100 bases:

>100_bases
GTAAAATTTTAATATGATAGTTTATGGGAAGCAAATATTTTTTTATATTTTAGAATATCATAAAGACTGTATCAATGAGC
TTTATTTAGCAAAAGAATGT

Product: tetrapyrrole methylase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLLNTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKN
VAYLSDAGMPGISDPGKALVEFAQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
IIYESPKRILSLVEQIMILDSQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGEWVVVLQSKEQNFLQNTLCEKDI
MDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD

Sequences:

>Translated_274_residues
MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLLNTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKN
VAYLSDAGMPGISDPGKALVEFAQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
IIYESPKRILSLVEQIMILDSQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGEWVVVLQSKEQNFLQNTLCEKDI
MDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD
>Mature_274_residues
MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLLNTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKN
VAYLSDAGMPGISDPGKALVEFAQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
IIYESPKRILSLVEQIMILDSQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGEWVVVLQSKEQNFLQNTLCEKDI
MDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=279, Percent_Identity=34.7670250896057, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31077; Mature: 31077

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLLNTKFHTDIHISKFIAL
CEEECCCCCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH
HSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEFAQENNITYEILPGANAAL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHH
VALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPSIIYESPKRILSLVEQIMILD
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHC
SQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGEWVVVLQSKEQNFLQNTLCEKDI
CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
MDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLLNTKFHTDIHISKFIAL
CEEECCCCCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH
HSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEFAQENNITYEILPGANAAL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHH
VALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPSIIYESPKRILSLVEQIMILD
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHC
SQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGEWVVVLQSKEQNFLQNTLCEKDI
CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
MDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA