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The map label for this gene is yjfH [C]

Identifier: 57237161

GI number: 57237161

Start: 155377

End: 156060

Strand: Reverse

Name: yjfH [C]

Synonym: CJE0149

Alternate gene names: 57237161

Gene position: 156060-155377 (Counterclockwise)

Preceding gene: 57237162

Following gene: 57237160

Centisome position: 8.78

GC content: 31.87

Gene sequence:

>684_bases
ATGATAGTTTATGGGAAGCAAATATTTTTTTATATTTTAGAATATCATAAAGACTGTATCAATGAGCTTTATTTAGCAAA
AGAATGTGATAAAATTACTTTTTCCAAAATCGCAAAATCTGGTTTTAAAATCAAAAAACTTGATTTTAAAACTGCTCAAG
CTTATGCGAAAGGTGGAAATCATCAAGGTTTTTTGCTAGATATTAAAGAAAGTTCTTTTGCGAATTTAAATGAGATCAAA
AAAAATGATTTTATTGTTATGCTTTATGGAATTAGCGATGTAGGAAATATAGGGGCTATCACGCGTACAGCTTATGCTTT
AGGGGTTGGGGCTTTAATTTTTATTGGTGAAAAATTAGCCATGGAAGGAGTAATTCGCACAAGCAGCGGAGCGGCTCTTG
ATTTACCTATTGCAATAAGCAACGATGCTTTAAGTGTAATAAACGAACTAAAACAAGTAGGTTTTTATTTTTATGCGAGC
GATGGCTCGGGAAAAGAAATTCACAGTGTAAAAATAAGCAATGGTAAAAAAGTTTTAGTTTTGGGTAGTGAGGGTTTTGG
TTTAAGCTCTAAAATTATAAAAAAGTGCGATGAATGTGTGGGCATTGCGATGAAAAATAATTTTGATAGTCTTAATGTCA
GCGCTGCTTTTGCAATACTTTGTGATAGGATGTTAAATGCTTAA

Upstream 100 bases:

>100_bases
TTAAAAGCAAAAGCAAAATTATTATCAAAGATCAATGGAAAAAATGCAAAAGAAATTTATCAAAAACTGCTTTTAAGTCA
AGATTAGGTAAAATTTTAAT

Downstream 100 bases:

>100_bases
TTGGAAAAAAATACAAGAATTAAATTTAAAAGAAGTTGCAGCAAAAACGCAAATTGAACTTGATTTTCTTGAAGCTTTAG
TAGAAAAGAATTTTGCTGTT

Product: RNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKIKKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIK
KNDFIVMLYGISDVGNIGAITRTAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIAISNDALSVINELKQVGFYFYAS
DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIIKKCDECVGIAMKNNFDSLNVSAAFAILCDRMLNA

Sequences:

>Translated_227_residues
MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKIKKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIK
KNDFIVMLYGISDVGNIGAITRTAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIAISNDALSVINELKQVGFYFYAS
DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIIKKCDECVGIAMKNNFDSLNVSAAFAILCDRMLNA
>Mature_227_residues
MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKIKKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIK
KNDFIVMLYGISDVGNIGAITRTAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIAISNDALSVINELKQVGFYFYAS
DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIIKKCDECVGIAMKNNFDSLNVSAAFAILCDRMLNA

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1790623, Length=230, Percent_Identity=25.2173913043478, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004441
- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 24728; Mature: 24728

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKIKKLDFKTAQAYAKGGN
CEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCHHHHHHHCCCC
HQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITRTAYALGVGALIFIGEKLA
CCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MEGVIRTSSGAALDLPIAISNDALSVINELKQVGFYFYASDGSGKEIHSVKISNGKKVLV
HHHEEECCCCCEEEEEEEECCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCEEEE
LGSEGFGLSSKIIKKCDECVGIAMKNNFDSLNVSAAFAILCDRMLNA
ECCCCCCCHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKIKKLDFKTAQAYAKGGN
CEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCHHHHHHHCCCC
HQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITRTAYALGVGALIFIGEKLA
CCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MEGVIRTSSGAALDLPIAISNDALSVINELKQVGFYFYASDGSGKEIHSVKISNGKKVLV
HHHEEECCCCCEEEEEEEECCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCEEEE
LGSEGFGLSSKIIKKCDECVGIAMKNNFDSLNVSAAFAILCDRMLNA
ECCCCCCCHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]