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The map label for this gene is yfdZ [H]

Identifier: 57237158

GI number: 57237158

Start: 152432

End: 153634

Strand: Reverse

Name: yfdZ [H]

Synonym: CJE0146

Alternate gene names: 57237158

Gene position: 153634-152432 (Counterclockwise)

Preceding gene: 57237159

Following gene: 57237157

Centisome position: 8.64

GC content: 34.08

Gene sequence:

>1203_bases
ATGTTTGATGAAATCCGTTTTAATACCATAGAAAGACTTCCAAATTATGTTTTCGCAGAAGTAAATGCGATAAAAATGGC
AGCAAGACGTGCTGGAGAGGATATCATCGACTTTTCAATGGGAAATCCCGATGGTAAAACTCCACAACACATTATAGATA
AACTTTGTGAAAGTGCTAACAAAGATAAAACCTCGGGATATTCTACATCCATGGGGATTTATAAACTTCGCTTAGCAATT
TGTAATTGGTATAAAAGAAAATATAATGTCAACCTAGATCCTGAAAATGAAGTTGTAGCTACTATGGGTTCAAAAGAGGG
TTTTGTAAATCTTGCAAGAGCGATTATAAATCCTGGAGATGTTGCTATTGTGCCAACTCCTGCTTATCCTATACATACTC
AAGCTTTTATTATAGCAGGAGGTAATGTAGCAAAAATGCCTTTAGCTTATAATGAAAAATTTGAGCTTGATGAAAATCAA
TTTTTTGAAAATTTACATAAAACTTTAAATGAAAGCATCCCGCGTCCAAAATATGTCGTTGTTAATTTCCCGCATAATCC
AACAACAGTAACTTGTGAGAAAAGTTTTTATGAAAGATTGATAGCAACGGCAAAAAAAGAAAGATTTTATATTATTTCAG
ATATTGCTTATGCAGATTTAACTTATGATGACTATAAAACTCCTTCTATTTTGGAAATTGAAGGCGCAAAAGATATAGCG
GTAGAAACTTACACTCTTTCAAAATCTTACAATATGGCAGGCTGGCGCGTGGGTTTTGTAGTAGGAAATAAACGCTTAGT
CAGTGCGCTTAAAAAAATAAAATCTTGGTTTGATTATGGTATGTACACACCTATTCAAGTAGGAGCTACCATAGCTTTAG
ATGGAGATCAAACTTGTGTAGATGAAATCCGTGCAACTTATGATAAAAGAATGCACATTTTACTTGAAGCTTTTGAAAAT
GCAGGCTGGAAACTTCAAAAACCAAGAGCAAGTATGTTTGTTTGGGCAAAACTCCCTGAAAGCAAAAGACATTTAAAAAG
TTTAGAATTTTCAAAGCAACTTTTACAGCGTGCTAGTGTTGCAGTAAGTCCTGGGGTAGGTTTTGGCGAAGCAGGTGATG
AGTATGTAAGAATTGCTTTAATTGAAAATGAAAATCGCATACGCCAAGCTGCACGTAATATCAAAAAATATTTAAAAGAG
TAA

Upstream 100 bases:

>100_bases
TTCCAAATGGTGCTATATATGCTATTGTAAGCGATATGTATAGTTTAGATAATATACGCAGGGGTTTAAAAATCACACTT
AAAAAATAAAGGATTAAGAA

Downstream 100 bases:

>100_bases
GTTATGAAAGTAGCGATTCTTGGTTATGGCACTGTTGGAAGTGCGGTGGTTAAATTTCTTTTAGAAAATGATAAACTCAT
TCGTGCAAGATGTGGGCAAA

Product: aspartate aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPDGKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAI
CNWYKRKYNVNLDPENEVVATMGSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
FFENLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYADLTYDDYKTPSILEIEGAKDIA
VETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSWFDYGMYTPIQVGATIALDGDQTCVDEIRATYDKRMHILLEAFEN
AGWKLQKPRASMFVWAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAARNIKKYLKE

Sequences:

>Translated_400_residues
MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPDGKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAI
CNWYKRKYNVNLDPENEVVATMGSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
FFENLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYADLTYDDYKTPSILEIEGAKDIA
VETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSWFDYGMYTPIQVGATIALDGDQTCVDEIRATYDKRMHILLEAFEN
AGWKLQKPRASMFVWAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAARNIKKYLKE
>Mature_400_residues
MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPDGKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAI
CNWYKRKYNVNLDPENEVVATMGSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
FFENLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYADLTYDDYKTPSILEIEGAKDIA
VETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSWFDYGMYTPIQVGATIALDGDQTCVDEIRATYDKRMHILLEAFEN
AGWKLQKPRASMFVWAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAARNIKKYLKE

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713256, Length=413, Percent_Identity=21.3075060532688, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI56713254, Length=413, Percent_Identity=21.3075060532688, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI95147551, Length=413, Percent_Identity=19.3704600484261, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI169881279, Length=413, Percent_Identity=19.3704600484261, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788722, Length=396, Percent_Identity=52.5252525252525, Blast_Score=449, Evalue=1e-127,
Organism=Escherichia coli, GI1786816, Length=376, Percent_Identity=22.6063829787234, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1788627, Length=386, Percent_Identity=24.6113989637306, Blast_Score=94, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994476, Length=405, Percent_Identity=24.9382716049383, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71994472, Length=405, Percent_Identity=24.9382716049383, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17567369, Length=400, Percent_Identity=22.25, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17567663, Length=395, Percent_Identity=23.2911392405063, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322401, Length=392, Percent_Identity=22.9591836734694, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320317, Length=351, Percent_Identity=21.9373219373219, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28573069, Length=394, Percent_Identity=19.5431472081218, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24646114, Length=394, Percent_Identity=19.5431472081218, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573067, Length=394, Percent_Identity=19.5431472081218, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573065, Length=394, Percent_Identity=19.5431472081218, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 45409; Mature: 45409

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPDGKTPQHIIDKLCESAN
CCCCHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCC
KDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATMGSKEGFVNLARAIINPGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCC
VAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQFFENLHKTLNESIPRPKYVV
EEEEECCCCCCCCEEEEEECCCEEECCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
VNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYADLTYDDYKTPSILEIEGAKDIA
EECCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCEEEECCCCCEE
VETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSWFDYGMYTPIQVGATIALDGDQTCV
EEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCHHHH
DEIRATYDKRMHILLEAFENAGWKLQKPRASMFVWAKLPESKRHLKSLEFSKQLLQRASV
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCE
AVSPGVGFGEAGDEYVRIALIENENRIRQAARNIKKYLKE
EECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPDGKTPQHIIDKLCESAN
CCCCHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCC
KDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATMGSKEGFVNLARAIINPGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCC
VAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQFFENLHKTLNESIPRPKYVV
EEEEECCCCCCCCEEEEEECCCEEECCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
VNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYADLTYDDYKTPSILEIEGAKDIA
EECCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCEEEECCCCCEE
VETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSWFDYGMYTPIQVGATIALDGDQTCV
EEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCHHHH
DEIRATYDKRMHILLEAFENAGWKLQKPRASMFVWAKLPESKRHLKSLEFSKQLLQRASV
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCE
AVSPGVGFGEAGDEYVRIALIENENRIRQAARNIKKYLKE
EECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]