Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 57237138

GI number: 57237138

Start: 132010

End: 133383

Strand: Direct

Name: yebA [C]

Synonym: CJE0126

Alternate gene names: 57237138

Gene position: 132010-133383 (Clockwise)

Preceding gene: 57237137

Following gene: 57237139

Centisome position: 7.43

GC content: 29.84

Gene sequence:

>1374_bases
ATGGCAAAAAGAAAAGGCAAAACTTATTTATCTGTTTTAATTTTAGTTTTAATAGCAATTTTGATTTTTTTTATTTCAAG
ATTAAGTATTTTTGAAAAAAATCCTCCTCAAATTTTAATGCCAGATGTTGTATATACTGATCTTAAAAAACCTATTTTAG
TGCATATTAAAGATGATGAAAGTTCTATCAAAAACGTACAAATTATATTGCATAAAGACGACAATACTAGTGCAATGGTT
ATAGCAGATGAAAAGATTTCTAATTTAAAAGATATTACCTTACAAGTTGCTTTGCCAAAATTTGGTTACAAAGAAAATGT
AAAATCTTTTGTTTTGGAGGCGATAGCTAAAGATTCTAGTTTTTGGAATTTTTTTAGTGGCAATGAAGCAAGAAAACAAA
TTGCGGTATTAGTAGATAATACGGCTCCAAAAATCAATATCATAAGCAATTCTTACCAAATCGAGCAAGGTGGTGCTGGG
GCAGTTGTTTTTAAGGCTGATGATGCTAATTTAGATAAGGTGTATATAGAAACAAATAAAGGTAAAATCTTTAAAGCCAC
ACCTTATGTAAAAGAAGGATATTATGCGGCTTTGATTGCTTGGGATGCAAGAGATGAGGAATTTCGTGCATTTGTTATCG
CTACGGATAAAGCGGGCAATATTTCAAAAGAACGTATAAGGTATTATTTTGTTAATCGTAAATATCGTGTTTCAAATATC
AATCTAACGGATAAATTTTTAGATGGAAAGATTGAGAATTTAGCAAATCAGTACGCTCCAAAAGATAATAATCTCAATCG
TTATGAAAAATTTAAGTTTGTCAATGAAACTTTAAGAAATAGCAATGAAAAACTTATCCATGAAATCACTTCAAAAGTAC
CTGAGGAAAAAATTGATAATTTTGATTTGAATTTATTTTTACCTCTTAAAAATGGTATGAAAGTAGCGGATTTTGCTGAT
CATAGGTATTATTCTTATAATGGGCAATTTGTGAGTGATTCTTATCATATGGGGCTTGATCTAGCAAGCGTAGCACAAGC
TCCTATCATAAGTAATAACGCAGGCAAGGTTGTTTTTGCTGCTGAAAATGGAATTTATGGTTTAAATTTAATTGTTTATC
ATGGTTTTGGAGTATATAGTCTTTATGGGCACTGTTCTTCTAAAAATGTTGATTTAGATGAAATGATTAATAAACAAAGC
ATTATAGGCAAAACAGGAACAAGTGGTTTAGCCTTAGGCGATCATTTGCATTTTGGAGTTTTGGTTCAAGGGGTTGAAAC
GCGTCCTGAACAATGGCAAGATAAAAAATGGATAGAAAATAATATTTACAATGTTTTAAATGATGGTAAAAAGATAATTT
TAGGAAAAAATTAA

Upstream 100 bases:

>100_bases
ACCCTAAGAGAAATTTTATAAATTTGCTAGATATTTACTGAAAATATAATAGAATTTATATTAAAAGCAACAAAAACATT
GAAAATTTTTAAGGAAGGTT

Downstream 100 bases:

>100_bases
TGAAACAATTAACTTTAGCAAAAACTGTCAAAGGCGTAGGTATAGGACTTCATAAGGGTGAACCCATAGAAATTACTTTA
GAGCCTTTAGAAGCAAATAG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: Peptidase M; M24/M37 Family Peptidase; M23/M37 Peptidase Domain-Containing Protein; M23 Peptidase Domain Protein; Membrane Peptidase; Metalloendopeptidase Related Membrane Protein; M23 Peptidase Domain-Containing Protein; Metallopeptidase; Cell Wall Endopeptidase Family; Lipoprotein NlpD Fragment; Lytic Transglycosylase Catalytic; M23/M37 Family Endopeptidase; M23 Family Peptidase; Metalloendopeptidase-Like Membrane Protein; LysM/M23/M37 Peptidase; Zinc Metalloendopeptidase; Cytoplasmic Membrane Protein; M23/M37 Family Metalloendoprotease; Tyrosyl-TRNA Synthetase; Peptidoglycan-Specific Endopeptidase; Phage Protein; Metalloprotease YebA; Periplasmic Protein; Lipoprotein

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHIKDDESSIKNVQIILHKDDNTSAMV
IADEKISNLKDITLQVALPKFGYKENVKSFVLEAIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
AVVFKADDANLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYRVSNI
NLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNETLRNSNEKLIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFAD
HRYYSYNGQFVSDSYHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQS
IIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN

Sequences:

>Translated_457_residues
MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHIKDDESSIKNVQIILHKDDNTSAMV
IADEKISNLKDITLQVALPKFGYKENVKSFVLEAIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
AVVFKADDANLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYRVSNI
NLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNETLRNSNEKLIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFAD
HRYYSYNGQFVSDSYHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQS
IIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN
>Mature_456_residues
AKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHIKDDESSIKNVQIILHKDDNTSAMVI
ADEKISNLKDITLQVALPKFGYKENVKSFVLEAIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAGA
VVFKADDANLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYRVSNIN
LTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNETLRNSNEKLIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADH
RYYSYNGQFVSDSYHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQSI
IGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 51697; Mature: 51566

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHIKDDE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCEEEEEECCC
SSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFGYKENVKSFVLEAIAKDSS
CCCCEEEEEEEECCCCCEEEEECHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
FWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAGAVVFKADDANLDKVYIETNK
CEEECCCCCCCEEEEEEEECCCCEEEEEECCEEEECCCCEEEEEEECCCCCEEEEEECCC
GKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYRVSNI
CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCHHEEEEEEECCEEEEEEC
NLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNETLRNSNEKLIHEITSKVPEEKIDN
CCHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCC
FDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDSYHMGLDLASVAQAPIISNNAGKVVFA
CCEEEEEECCCCCEEEEECCCCEEEECCEEECCCEECCCCHHHHHCCCEEECCCCEEEEE
AENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQSIIGKTGTSGLALGDHLHFGV
ECCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHCHHHHCCCCCCCCCEECCCEEEEE
LVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN
EEECCCCCCCHHCCHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure 
AKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHIKDDE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCEEEEEECCC
SSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFGYKENVKSFVLEAIAKDSS
CCCCEEEEEEEECCCCCEEEEECHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
FWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAGAVVFKADDANLDKVYIETNK
CEEECCCCCCCEEEEEEEECCCCEEEEEECCEEEECCCCEEEEEEECCCCCEEEEEECCC
GKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYRVSNI
CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCHHEEEEEEECCEEEEEEC
NLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNETLRNSNEKLIHEITSKVPEEKIDN
CCHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCC
FDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDSYHMGLDLASVAQAPIISNNAGKVVFA
CCEEEEEECCCCCEEEEECCCCEEEECCEEECCCEECCCCHHHHHCCCEEECCCCEEEEE
AENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQSIIGKTGTSGLALGDHLHFGV
ECCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHCHHHHCCCCCCCCCEECCCEEEEE
LVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN
EEECCCCCCCHHCCHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA