| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is tyrA [H]
Identifier: 57237137
GI number: 57237137
Start: 131103
End: 131930
Strand: Direct
Name: tyrA [H]
Synonym: CJE0125
Alternate gene names: 57237137
Gene position: 131103-131930 (Clockwise)
Preceding gene: 57237129
Following gene: 57237138
Centisome position: 7.37
GC content: 30.31
Gene sequence:
>828_bases ATGAAAATAGCAATTATAGGGCTTGGGCTTATGGGTGGATCTTTAGGGCTTTGTTTGAAAGAAAATAAGCTTATTTCTTG TGTTTATGGTATGGATTTAAGCAAAGAAAATGAAAAAGATGCCCTGCAATTAGGTCTTATTCATGAGCTTATAGAATTTA AAGATTTAGCTTTATGTGATATGATTTTTGTCGCAACTCCTGTTGATGCTATTATAGCAATTTTGCAAAAGTTAGTTGAT TTGCCTTCTAATGTAACAATTATAGAGCTTGGAAGTACAAAAAGAAAAATTATAGAAAGTTTGCCTAAGAATTTAATCAA ACAAACTCTTTTTGCTCATCCTATGACAGGAACTGAAAATTCAGGTCCAAAAGCAGCTTTTAAAGAGCTTTATAAAGATG CAGTTTGTGTTCTTTGTGATAGTGAAATAGCTGATGATTTACATCAAAAAAGAGCGGTAGAAATTTTTTCTCATTTAGGG ATGAAAATTGTTTTTATGGATAGTAAAGCCCATGATCATCATGCTGCTATTATTTCTCATTTGCCTCATGTTATAAGTTT TTCTTTGGCAAATTTTGTAATGAAGGAAGAAGATAAAAGAAATATAGTTCATTTAGCCGGAGGATCTTTTAAAGGTATGA GCAGAATTGCCAAATCATCGCCACAAATGTGGGAAAGTATTTTTTTACAAAATAAAGATAACTTATTAAGTTCTATTGAT TTTTTTCAACAAGAATTAGAGAGATGTAAACAAATGATACAATTAGACAAAAACGATGAATTAAGAGAATGGATGAAACA GGCTAATACCCTAAGAGAAATTTTATAA
Upstream 100 bases:
>100_bases AATACTAATAAGATGTTTTTTCATTGATTTTTTACCTAAAGCTTTATTAAAAGCTGTATAATAGCAAAAAAAATTTAACA AAAAAACTAAGGTAGAAAGT
Downstream 100 bases:
>100_bases ATTTGCTAGATATTTACTGAAAATATAATAGAATTTATATTAAAAGCAACAAAAACATTGAAAATTTTTAAGGAAGGTTA TGGCAAAAAGAAAAGGCAAA
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQLGLIHELIEFKDLALCDMIFVATPVDAIIAILQKLVD LPSNVTIIELGSTKRKIIESLPKNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAKSSPQMWESIFLQNKDNLLSSID FFQQELERCKQMIQLDKNDELREWMKQANTLREIL
Sequences:
>Translated_275_residues MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQLGLIHELIEFKDLALCDMIFVATPVDAIIAILQKLVD LPSNVTIIELGSTKRKIIESLPKNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAKSSPQMWESIFLQNKDNLLSSID FFQQELERCKQMIQLDKNDELREWMKQANTLREIL >Mature_275_residues MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQLGLIHELIEFKDLALCDMIFVATPVDAIIAILQKLVD LPSNVTIIELGSTKRKIIESLPKNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAKSSPQMWESIFLQNKDNLLSSID FFQQELERCKQMIQLDKNDELREWMKQANTLREIL
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 30904; Mature: 30904
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQLGLIHELIEFKDLALCD CEEEEEEEEHHCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MIFVATPVDAIIAILQKLVDLPSNVTIIELGSTKRKIIESLPKNLIKQTLFAHPMTGTEN HHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC SGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLGMKIVFMDSKAHDHHAAIISH CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH LPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAKSSPQMWESIFLQNKDNLLSSID HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH FFQQELERCKQMIQLDKNDELREWMKQANTLREIL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQLGLIHELIEFKDLALCD CEEEEEEEEHHCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MIFVATPVDAIIAILQKLVDLPSNVTIIELGSTKRKIIESLPKNLIKQTLFAHPMTGTEN HHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC SGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLGMKIVFMDSKAHDHHAAIISH CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH LPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAKSSPQMWESIFLQNKDNLLSSID HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH FFQQELERCKQMIQLDKNDELREWMKQANTLREIL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]