| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is ylxH [H]
Identifier: 57237073
GI number: 57237073
Start: 75463
End: 76329
Strand: Reverse
Name: ylxH [H]
Synonym: CJE0060
Alternate gene names: 57237073
Gene position: 76329-75463 (Counterclockwise)
Preceding gene: 57237074
Following gene: 57237072
Centisome position: 4.29
GC content: 31.26
Gene sequence:
>867_bases ATGAATAACCAAGCAAATAAACTTCGCAATCTCATGAGTCAAAATGGAACCAAAAAATCCCAAAACACTCATTTTATAGC TATTACAAGTGGAAAAGGTGGCGTTGGAAAAAGTACGATTAGCGCGAATCTAGCCAATGTTTTAGCAAATAATGGCTATA AAGTTGGGCTTTTTGATGCTGATATTGGCTTGGCAAATTTGGATGTCATTTTAAATGTACGCATACAAAAAAATCTCTTG CATGTTTTACGCGGAGAATGCTCCTTGGAAGACATTTTAATAGAAGTTAAGCCAAATTTATGGCTCATCCCAGGCGAAAG TGGAGATGAGATTTTAAAATATAATGATAAAAATATTTACGAGAGATTTTTAAATCAAGCAAGTATTTTAGATGAACTTG ATTTTCTTATTATCGACACAGGCGCGGGTATTGGTGGAAATATTTTAAATTTTTTAGAAATGGCTGATGAAGTTATAGTA GTAACTGTTCCTGATCCTGCAGCAATCACTGATGCGTATGCAACCATAAAAACAACTTCTAAGACAAAAGAAAATTTACT AATGCTCTTTAATGTTGTAAAAAATGAAAATGAAGCTTTAAAAGTTTTTGAAAATATTAAAAAAGTTGCAGATGCAAACA TTAAAAATCCTTTAAATTTAGAATTCTTAGGTCATTTAAGCGCTTCTAAAGATGTAAGTGGTAGTATTAAAAAAAGAACT TTATTTAGCGATGAAAACACAGCCTCAAGTGATGAGATTAAAGCCCTAGCTTCCAAGCTTTTATATAGATTGGAACGGAA AGTGCTTGATAATGTTTCAAATCGTAGTTTTTCAAGTTTTTTTAGAAAAATTATTGAAAGATTTTAG
Upstream 100 bases:
>100_bases TTTTTCTCTATAGGACAAGAAGTGCCAGATGATTTAGAAGTAGCCAATAGTGATTTTCTAGTTCATTGTATTTTAGAAGG GTTTAACAAAGGAAAAAATA
Downstream 100 bases:
>100_bases CAATAAAGAGAAGAGATTATGAGGCCAGAAAATTACGTAGCATTTTTCACTGTTTGTGGATTTTTTATAGGACTTGCATT TAGCATTATTAGTATAGATG
Product: ParaA family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANLANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLL HVLRGECSLEDILIEVKPNLWLIPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPLNLEFLGHLSASKDVSGSIKKRT LFSDENTASSDEIKALASKLLYRLERKVLDNVSNRSFSSFFRKIIERF
Sequences:
>Translated_288_residues MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANLANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLL HVLRGECSLEDILIEVKPNLWLIPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPLNLEFLGHLSASKDVSGSIKKRT LFSDENTASSDEIKALASKLLYRLERKVLDNVSNRSFSSFFRKIIERF >Mature_288_residues MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANLANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLL HVLRGECSLEDILIEVKPNLWLIPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPLNLEFLGHLSASKDVSGSIKKRT LFSDENTASSDEIKALASKLLYRLERKVLDNVSNRSFSSFFRKIIERF
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=174, Percent_Identity=35.0574712643678, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31862; Mature: 31862
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANLANVLANNGYKVGLFDA CCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC DIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWLIPGESGDEILKYNDKNIY CCCEEEEEEEEEEHHHHHHHHHHHCCCCHHHEEEEECCCEEEEECCCCCCCEEECCHHHH ERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIVVTVPDPAAITDAYATIKTTS HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEEECC KTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPLNLEFLGHLSASKDVSGSIKKRT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCCCCHHHHE LFSDENTASSDEIKALASKLLYRLERKVLDNVSNRSFSSFFRKIIERF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANLANVLANNGYKVGLFDA CCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC DIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWLIPGESGDEILKYNDKNIY CCCEEEEEEEEEEHHHHHHHHHHHCCCCHHHEEEEECCCEEEEECCCCCCCEEECCHHHH ERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIVVTVPDPAAITDAYATIKTTS HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEEECC KTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPLNLEFLGHLSASKDVSGSIKKRT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCCCCHHHHE LFSDENTASSDEIKALASKLLYRLERKVLDNVSNRSFSSFFRKIIERF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]