| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237068
Identifier: 57237068
GI number: 57237068
Start: 71852
End: 72448
Strand: Direct
Name: 57237068
Synonym: CJE0055
Alternate gene names: NA
Gene position: 71852-72448 (Clockwise)
Preceding gene: 57237067
Following gene: 57237077
Centisome position: 4.04
GC content: 29.48
Gene sequence:
>597_bases ATGGAAAAAATTCTAAAAATTTTATTATTTTTACCCATTCTTACTTTGAGCGCAAAAGCGGAATGGGTAGTTAAATCCTA TCAAGAAATTAAAAACGAAAGAGTAATAAGGCAAACTTACGAGCAATCTTGTGGGGCTTCATCTTTGGCAACTTTACTCA ATATACTTGATGATAAAAAGTTTGATGAACTTGAACTTTTAAAGATTATGAGTGGACAGGAACTTTATACGGATATGGTA AGCTTTGCAGATTTAAGCGATGCAGTTAAAAAACTAGGCTATGAAAGCAATTCATATCAAATCAATAGAGAAAACTTGGA TAAACTTGTAAATATTCCAATGCTTGTAAAAATTGAAGATGATCCACGCTTTCCACATTTTGTTATAATTATCAATCATA AAGGTAATTATTTACAAGTGCTTGATCCAAGTCATGGAGAATATATAAGTTCTAAAAGTCAATTTTTTAGTATTTGGGAT AGATATAATAAAGGTGGTTATGCTTTAATTGTTGCTCCTAAAAAAGAGCTAAAACCTTTTAAGTTAAATACTCCAAAATC TTTACATTTTGATTTCAGCCCTTTTAGTTTGTTTTAG
Upstream 100 bases:
>100_bases TAGGTTCTACTTATAGCATTAATTCAGATACCGCAGTTTCTGTTAATGCTAGTTTTGGAGGAAGCTCTGCTTCTCCTGAT AGCATATTTGGGATAAGCTT
Downstream 100 bases:
>100_bases TTTTAATTCGTTTATATTTATTATTCTTAATTTGTAGGCTAAAACTTTTTATCTTAGTTGTTCTAATCTTTCTTTTTTAG AACCAATTTCTGTAATTTGA
Product: peptidase
Products: NA
Alternate protein names: Peptidase
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MEKILKILLFLPILTLSAKAEWVVKSYQEIKNERVIRQTYEQSCGASSLATLLNILDDKKFDELELLKIMSGQELYTDMV SFADLSDAVKKLGYESNSYQINRENLDKLVNIPMLVKIEDDPRFPHFVIIINHKGNYLQVLDPSHGEYISSKSQFFSIWD RYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF
Sequences:
>Translated_198_residues MEKILKILLFLPILTLSAKAEWVVKSYQEIKNERVIRQTYEQSCGASSLATLLNILDDKKFDELELLKIMSGQELYTDMV SFADLSDAVKKLGYESNSYQINRENLDKLVNIPMLVKIEDDPRFPHFVIIINHKGNYLQVLDPSHGEYISSKSQFFSIWD RYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF >Mature_198_residues MEKILKILLFLPILTLSAKAEWVVKSYQEIKNERVIRQTYEQSCGASSLATLLNILDDKKFDELELLKIMSGQELYTDMV SFADLSDAVKKLGYESNSYQINRENLDKLVNIPMLVKIEDDPRFPHFVIIINHKGNYLQVLDPSHGEYISSKSQFFSIWD RYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF
Specific function: Unknown
COG id: COG3271
COG function: function code R; Predicted double-glycine peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22903; Mature: 22903
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS50990 PEPTIDASE_C39
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKILKILLFLPILTLSAKAEWVVKSYQEIKNERVIRQTYEQSCGASSLATLLNILDDKK CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC FDELELLKIMSGQELYTDMVSFADLSDAVKKLGYESNSYQINRENLDKLVNIPMLVKIED CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCEEEEECC DPRFPHFVIIINHKGNYLQVLDPSHGEYISSKSQFFSIWDRYNKGGYALIVAPKKELKPF CCCCCEEEEEEECCCCEEEEECCCCCCHHCCHHHHHHHHHHCCCCCEEEEEECHHHCCCE KLNTPKSLHFDFSPFSLF ECCCCCCEEECCCCCCCC >Mature Secondary Structure MEKILKILLFLPILTLSAKAEWVVKSYQEIKNERVIRQTYEQSCGASSLATLLNILDDKK CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC FDELELLKIMSGQELYTDMVSFADLSDAVKKLGYESNSYQINRENLDKLVNIPMLVKIED CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCEEEEECC DPRFPHFVIIINHKGNYLQVLDPSHGEYISSKSQFFSIWDRYNKGGYALIVAPKKELKPF CCCCCEEEEEEECCCCEEEEECCCCCCHHCCHHHHHHHHHHCCCCCEEEEEECHHHCCCE KLNTPKSLHFDFSPFSLF ECCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA