| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is mtaD [H]
Identifier: 57237077
GI number: 57237077
Start: 78832
End: 80061
Strand: Direct
Name: mtaD [H]
Synonym: CJE0064
Alternate gene names: 57237077
Gene position: 78832-80061 (Clockwise)
Preceding gene: 57237068
Following gene: 57237078
Centisome position: 4.43
GC content: 28.94
Gene sequence:
>1230_bases GTGTTTATAGTTACTGCAAGATATCTTTTTTTATGCGATGAAGATTTTACGATACTAGAAAATCAAGCCTTTGTTTTTGA AGATAAAATTTTAGAATTGGGTGAATTGGATAATTTAAGAAAAAAATATCCCAAGGCTAAAATCATCAAAACACCTAAAA ATTCGGTTATTTTACCTGCTTTTATAAATCCTCACACACACTTAGAATTTAGTGCAAATTCAACAACTTTACATTTTGGA GAATTTTTAATTTGGCTTAAAAGTGTTATAAATTCTCGTTCCATGTTAAATGCACAGGCCAAAGAAGAATTAATACTTCA AAGTATTAAAAAAATGCAAAAAAGCGGTATAGGCACTATAGGTGAAATTTCAAGTTTTGGGAGTGATTTAGATCCTTGCT TAAAGGCTAGTCACAAGGGTATGCGTATAGTATTTTTTAATGAAATTTTGGGTACAAATGAAAATCAAGTTGAAGATAAA AAACAAGAATTTTTAAAAAGATTTGAAAATTCTTTGAAATTTAAAAATGATTTTTTTATCCCGGCAATTTCGATTCATTC TCCTTATTCAACTCATCCTAGTTTGGCTCATTTTGCTCTTGATTTAGCTAAAAAGCAAAATTTACTAGTTAGTACGCATT TTTTAGAAAGTAAGGCTGAAAATATCTGGCTTAGAGAGTCTAAAGGGAGTTTTAAAAAATGGCTTGAAAATTTCACACTT CATCCTAAGCCTCTTTATACACCAAAGGATTTTGTTAAACTTTTTAAAGGAGTAAGGACTCTTTTTACGCATTGTGTTTA TCTAAAAGAATATGAATGGTTAGATAAAAATTTACATTCTATTACACATTGTGCATTTTCAAATCGCCTTTTAAGTCAAA AAAGCTTAGATTTAAAAACGGCTTTAAAAAGTGGATTAAATATCCATTTAGGAACCGATGGACTTAGCTCAAATATTTCA TTGTCTTTACTTGATGAAATGCGCGCGAATTTGCTTATACATAAGAATTTTGATTTATTAGAGTTAGCCTCTAAGCTTTT GCAAATGGTAACACTTTATCCTGCAAGGGCTTTAAATTTAAATTTAGGAGAGCTTAAAAAAGGTAAAATTGCTGATTTTA ACGTATTTGAGCTAGGAGAATGTGATAAAAAGCAAGCTCCTTTGCAGTTTATTTTAAATGCTAAGGAAGTAGATAAATTA TTTATAAAAGGAAAAGAATGCAAATTTTAA
Upstream 100 bases:
>100_bases TTATTTTCATGGATTTAACCTTAAAAATTTATTTTTAACCTTTTATTATAACATTTTAAAAATAAATTTTTGCTACAATG TAATTTTTGAAAGGAAAATC
Downstream 100 bases:
>100_bases AATCATTTTTTAAGGCTTTAGGATGCGGTATAAAATTTATCAATACTTATTTTAAAACCTTTGTTTTATTGTTGATTGTT ATATGGATTTTAATGCCTAG
Product: chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MFIVTARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYPKAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFG EFLIWLKSVINSRSMLNAQAKEELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDK KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESKAENIWLRESKGSFKKWLENFTL HPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDKNLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNIS LSLLDEMRANLLIHKNFDLLELASKLLQMVTLYPARALNLNLGELKKGKIADFNVFELGECDKKQAPLQFILNAKEVDKL FIKGKECKF
Sequences:
>Translated_409_residues MFIVTARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYPKAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFG EFLIWLKSVINSRSMLNAQAKEELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDK KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESKAENIWLRESKGSFKKWLENFTL HPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDKNLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNIS LSLLDEMRANLLIHKNFDLLELASKLLQMVTLYPARALNLNLGELKKGKIADFNVFELGECDKKQAPLQFILNAKEVDKL FIKGKECKF >Mature_409_residues MFIVTARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYPKAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFG EFLIWLKSVINSRSMLNAQAKEELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDK KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESKAENIWLRESKGSFKKWLENFTL HPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDKNLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNIS LSLLDEMRANLLIHKNFDLLELASKLLQMVTLYPARALNLNLGELKKGKIADFNVFELGECDKKQAPLQFILNAKEVDKL FIKGKECKF
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Escherichia coli, GI1789249, Length=404, Percent_Identity=23.7623762376238, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 46876; Mature: 46876
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIVTARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYPKAKIIKTPKNSVILPA CEEEEEEEEEEECCCCEEECCCEEEEHHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEEE FINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNAQAKEELILQSIKKMQKSGIGTI EECCCCEEEEECCCCEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDKKQEFLKRFENSLKFKNDFFI HHHHHCCCCCCHHHHHCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE PAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESKAENIWLRESKGSFKKWLENFTL EEEEECCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHCCEEEECCCCHHHHHHHCCCC HPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDKNLHSITHCAFSNRLLSQKSLDLKT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIHKNFDLLELASKLLQMVTLYPARALNL HHHCCCEEEECCCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCEECC NLGELKKGKIADFNVFELGECDKKQAPLQFILNAKEVDKLFIKGKECKF CCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHHHCCCCCCCC >Mature Secondary Structure MFIVTARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYPKAKIIKTPKNSVILPA CEEEEEEEEEEECCCCEEECCCEEEEHHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEEE FINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNAQAKEELILQSIKKMQKSGIGTI EECCCCEEEEECCCCEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDKKQEFLKRFENSLKFKNDFFI HHHHHCCCCCCHHHHHCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE PAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESKAENIWLRESKGSFKKWLENFTL EEEEECCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHCCEEEECCCCHHHHHHHCCCC HPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDKNLHSITHCAFSNRLLSQKSLDLKT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIHKNFDLLELASKLLQMVTLYPARALNL HHHCCCEEEECCCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCEECC NLGELKKGKIADFNVFELGECDKKQAPLQFILNAKEVDKLFIKGKECKF CCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA